RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MRPL40Q9NQ50 206 aaKnown RBP1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM106BQ9NUM4 274 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 DOK5Q9P104 306 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 HEY1Q9Y5J3 304 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 NPATQ14207 1427 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 BAHCC1Q9P281 2608 aa1.62□□□□□ -2.15
HMGB1P36-201ENST00000487709 ARAP3Q8WWN8 1544 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 EIF3AQ14152 1382 aaKnown RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 NCOA1Q15788 1441 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 PQLC2LA1A4F0 135 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 KNCNA6PVL3 124 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 REG1AP05451 166 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 SLC25A16P16260 332 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 BLVRBP30043 206 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 CD200P41217 278 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR1E2P47887 323 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 REG1BP48304 166 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 MARCKSL1P49006 195 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 PSME3P61289 254 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 POLR2GP62487 172 aaKnown RBP eCLIP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 HIST1H3AP68431 136 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 H3F3AP84243 136 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 PRDX4Q13162 271 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 HTR4Q13639 388 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 JOSD1Q15040 202 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 CDK10Q15131 360 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 ACOT6Q3I5F7 207 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 SMIM15Q7Z3B0 74 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 S100A7AQ86SG5 101 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZNF567Q8N184 647 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM75Q8N9X5 138 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR10X1Q8NGY0 326 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM172AQ8WUF8 416 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 BORCS7Q96B45 105 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 MRPS24Q96EL2 167 aaKnown RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 DNAJC30Q96LL9 226 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 KLF6Q99612 283 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 SIGMAR1Q99720 223 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 CMSS1Q9BQ75 279 aaKnown RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM109Q9BVC6 243 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 ULBP3Q9BZM4 244 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 MED28Q9H204 178 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 GID8Q9NWU2 228 aa1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 PAQR5Q9NXK6 330 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 PCYT1BQ9Y5K3 369 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZNF638Q14966 1978 aaKnown RBP1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 IGHV3-73A0A0B4J1V6 119 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 LINC00862A6NCI5 91 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 EEF1E1-BLOC1S5C9J1V9 151 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 H0YJX3 145 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 H3BQV1 296 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 UBFD1O14562 309 aaKnown RBP1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 MRASO14807 208 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 IGKV1-16P04430 117 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 RPSAP08865 295 aaKnown RBP1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 CST2P09228 141 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 IGHV3-30-3P0DP02 117 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 HSPA9P38646 679 aaKnown RBP1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 CTBP2P56545 445 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 HERVK_113P63121 156 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 IFITM2Q01629 132 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 BSPH1Q075Z2 132 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 PMAIP1Q13794 54 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 PDGFRLQ15198 375 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 TRIQKQ629K1 86 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM42Q69YG0 159 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 DHRS4L2Q6PKH6 230 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 C5orf46Q6UWT4 87 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 SDIM1Q6ZPB5 146 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 SLC36A1Q7Z2H8 476 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 ZNF550Q7Z398 422 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 C20orf196Q8IYI0 205 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 C1orf158Q8N1D5 194 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM86BQ8N661 226 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 MCFD2Q8NI22 146 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 NEK7Q8TDX7 302 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 MS4A6EQ96DS6 147 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR52B2Q96RD2 323 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 NIPSNAP1Q9BPW8 284 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 DCSTAMPQ9H295 470 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 TRABDQ9H4I3 376 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM32AQ9Y421 112 aaKnown RBP1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
HMGB1P36-201ENST00000487709 ROCK1Q13464 1354 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 KIF15Q9NS87 1388 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 A0A087WUJ7 227 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 A0A0J9YX75 114 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 OR7C1O76099 320 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 MT-CO2P00403 227 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 P0DMU3 169 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM231AP0DMU4 169 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 FAM231CP0DMU5 169 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 CDK2P24941 298 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 CA7P43166 264 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 MAP2K4P45985 399 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 TMEM33P57088 247 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 BTN3A2P78410 334 aa1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 SARNPP82979 210 aaKnown RBP1.59□□□□□ -2.15
HMGB1P36-201ENST00000487709 DEFA6Q01524 100 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms