RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 TMEM74BQ9NUR3 256 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 HILPDAQ9Y5L2 63 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
EPHB4-206ENST00000487222 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 M0R3E3 92 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 VENTXO95231 258 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 TMEM177Q53S58 311 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
EPHB4-206ENST00000487222 IGKV3D-11A0A0A0MRZ8 115 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
EPHB4-206ENST00000487222 EFNB1P98172 346 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 SP9P0CG40 484 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 SRIP30626 198 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 HINT1P49773 126 aaPredicted RBP12.54□□□□□ -0.4
EPHB4-206ENST00000487222 FXYD3Q14802 87 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 SIPA1L1O43166 1804 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 CTSSP25774 331 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 LOXL3P58215 753 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 RCC1LQ96I51 464 aaKnown RBP12.54□□□□□ -0.4
EPHB4-206ENST00000487222 NABP2Q9BQ15 211 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 CA7P43166 264 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
EPHB4-206ENST00000487222 MRPL32Q9BYC8 188 aaKnown RBP12.54□□□□□ -0.4
EPHB4-206ENST00000487222 hCG_38984A0A1B0GV85 526 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 SFTPCP11686 197 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 ZNF146Q15072 292 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 SLC25A53Q5H9E4 307 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 OR4A47Q6IF82 309 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 STPG3Q8N7X2 389 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 AICDAQ9GZX7 198 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 RAMP1O60894 148 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 FOLR2P14207 255 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 UCP1P25874 307 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 RPS20P60866 119 aaKnown RBP12.53□□□□□ -0.4
EPHB4-206ENST00000487222 OR9G1Q8NH87 305 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 PGLYRP4Q96LB8 373 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 TRAV30A0A087WSZ9 112 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
EPHB4-206ENST00000487222 GCHFRP30047 84 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 TGIF1Q15583 401 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 MUC15Q8N387 334 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 TMEM186Q96B77 213 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 ARID2Q68CP9 1835 aa12.53□□□□□ -0.4
EPHB4-206ENST00000487222 IGKV1D-43A0A0B4J1Z2 117 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 RNF222A6NCQ9 220 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 TIAF1O95411 115 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 MFAP4P55083 255 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 LPAR2Q9HBW0 351 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 TMEM238LA0A1B0GVL6 79 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 GAGE10A6NGK3 116 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 A6NJY4 79 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.4
EPHB4-206ENST00000487222 SLC25A34Q6PIV7 304 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 ZNF502Q8TBZ5 544 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 METTL26Q96S19 204 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 PLSCR2Q9NRY7 297 aa12.52□□□□□ -0.4
EPHB4-206ENST00000487222 CHCHD2Q9Y6H1 151 aaPredicted RBP12.52□□□□□ -0.4
EPHB4-206ENST00000487222 ZNF318Q5VUA4 2279 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 TGFBR3LH3BV60 316 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 SIAH2O43255 324 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 ZIC3O60481 467 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 OR10S1Q8NGN2 331 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 C16orf92Q96LL3 132 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 RTBDNQ9BSG5 229 aaPredicted RBP12.52□□□□□ -0.41
EPHB4-206ENST00000487222 GP6Q9HCN6 339 aa12.52□□□□□ -0.41
EPHB4-206ENST00000487222 A0A1W2PS18 150 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 FCGR2BP31994 310 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-206ENST00000487222 PPP1R32Q7Z5V6 425 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 NR2C2APQ86WQ0 139 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 VWCEQ96DN2 955 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 KIAA1644Q3SXP7 199 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 TMEM183AQ8IXX5 376 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 LEAP2Q969E1 77 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
EPHB4-206ENST00000487222 H3BVH4 76 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 SYNGR3O43761 229 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 IGFBP3P17936 291 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-206ENST00000487222 TMEM56-RWDD3S4R434 201 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 TBX6O95947 436 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-206ENST00000487222 LCN2P80188 198 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 DYNLRB2Q8TF09 96 aa12.51□□□□□ -0.41
EPHB4-206ENST00000487222 SRSF12Q8WXF0 261 aaKnown RBP12.51□□□□□ -0.41
EPHB4-206ENST00000487222 IGLV3-19P01714 112 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 HLA-DRB1P01911 266 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 TCTAP57738 103 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 VKORC1L1Q8N0U8 176 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 A0A1B0GTI1 187 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 FABP2P12104 132 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 BTCP35070 178 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 PSG9Q00887 426 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 DNM1P46Q6ZS02 220 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms