RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SAP30O75446 220 aa14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 SAA1P0DJI8 122 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 FCGR2CP31995 323 aa14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 CBX5P45973 191 aa14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 CDK10Q15131 360 aa14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 ZNF66Q6ZN08 573 aa14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 MFSD4AQ8N468 514 aa14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 SRSF12Q8WXF0 261 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 S100A16Q96FQ6 103 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-209ENST00000486100 XRCC3O43542 346 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 CREBL2O60519 120 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 PTHLHP12272 177 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 LSM3P62310 102 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 MSMO1Q15800 293 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 OR2B11Q5JQS5 317 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 MMD2Q8IY49 270 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 OR4S2Q8NH73 311 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 TCTEX1D2Q8WW35 142 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 ACOT12Q8WYK0 555 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 USMG5Q96IX5 58 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 ZNF430Q9H8G1 570 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 COA4Q9NYJ1 87 aa14.16□□□□□ -0.14
PRPF40A-209ENST00000486100 ACTL6BO94805 426 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 LY86O95711 162 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 APELAP0DMC3 54 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 ZP3P21754 424 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 BRWD1-AS2P59051 145 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 C11orf87Q6NUJ2 197 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 ADAD2Q8NCV1 583 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 SECTM1Q8WVN6 248 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 CCL28Q9NRJ3 127 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 TAS2R8Q9NYW2 309 aa14.15□□□□□ -0.14
PRPF40A-209ENST00000486100 ANKRD34BA5PLL1 514 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 TRIM64CA6NLI5 447 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 MPPED1O15442 326 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 PPYP01298 95 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 OR9G9P0C7N8 305 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 UBE2NLQ5JXB2 153 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 VKORC1L1Q8N0U8 176 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 ZBTB34Q8NCN2 500 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 OR5AP2Q8NGF4 316 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 OR13F1Q8NGS4 319 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 VSTM2AQ8TAG5 236 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 GIMAP1Q8WWP7 306 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 SNAPC3Q92966 411 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 OR4C12Q96R67 309 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 SPIN2AQ99865 258 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 SPIN2BQ9BPZ2 258 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 ELOVL1Q9BW60 279 aa14.14□□□□□ -0.15
PRPF40A-209ENST00000486100 OR2A4O95047 310 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 FCER2P06734 321 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 NHLRC4P0CG21 123 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 KIR2DS2P43631 304 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 DYRK1AQ13627 763 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 ZNF343Q6P1L6 599 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 PUSL1Q8N0Z8 303 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 TTC9CQ8N5M4 171 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 OR6Q1Q8NGQ2 317 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 OR2A7Q96R45 310 aa14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 PEF1Q9UBV8 284 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-209ENST00000486100 HRASP01112 189 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 SPNP16150 400 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 KLF5Q13887 457 aaPredicted RBP14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 SAMD12Q8N8I0 201 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 TMEM167AQ8TBQ9 72 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 SLC25A46Q96AG3 418 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 GPHA2Q96T91 129 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
PRPF40A-209ENST00000486100 MEIS3P1A6NDR6 274 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 TNFSF12O43508 249 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 RBMXL2O75526 392 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 KBTBD11O94819 623 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 MAS1LP35410 378 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 TAS2R20P59543 309 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 DEFA5Q01523 94 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 TMEM69Q5SWH9 247 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 C10orf55Q5SWW7 151 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 KCTD12Q96CX2 325 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 AIFM2Q9BRQ8 373 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 FUNDC2Q9BWH2 189 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 IFT46Q9NQC8 304 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 SMAD5-AS1Q9Y6J3 95 aa14.11□□□□□ -0.15
PRPF40A-209ENST00000486100 TRBV9A0A0B4J1U6 114 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 FAM223BA6NKX1 122 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 GP9P14770 177 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 FXYD4P59646 89 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 DHRS11Q6UWP2 260 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 SLC25A42Q86VD7 318 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 FAM223AQ8IWN6 122 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 SPAG16Q8N0X2 631 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 AKIP1Q9NQ31 210 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 ANAPC10Q9UM13 185 aa14.1□□□□□ -0.15
PRPF40A-209ENST00000486100 COL7A1Q02388 2944 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 TEX22C9J3V5 150 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 RBFOX2O43251 390 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 PRH1P02810 166 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 IL6RP08887 468 aaPredicted RBP14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 NAT1P18440 290 aa14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 RPL27AP46776 148 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-209ENST00000486100 NCS1P62166 190 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms