RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 B9D2Q9BPU9 175 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 HDHD3Q9BSH5 251 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ATG5Q9H1Y0 275 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 OR2D2Q9H210 308 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 FBXL15Q9H469 300 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 AKIP1Q9NQ31 210 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 SLC35D1Q9NTN3 355 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 TXNL4BQ9NX01 149 aaKnown RBP4.79□□□□□ -1.64
PTCD3-215ENST00000484203 FAM30AQ9NZY2 134 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 OR1A1Q9P1Q5 309 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 MRPS7Q9Y2R9 242 aaKnown RBP4.79□□□□□ -1.64
PTCD3-215ENST00000484203 NUBP2Q9Y5Y2 271 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ETV7Q9Y603 341 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 WSB1Q9Y6I7 421 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 STAB2Q8WWQ8 2551 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 IGKV1-6A0A0C4DH72 117 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 C13orf42A0A1B0GVH6 325 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 A0A1W2PN81 502 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 LINC01619G3V211 115 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 G3V318 75 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 K7EIL1 84 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 OVOL1O14753 267 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 IGKV1-16P04430 117 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 HSPB1P04792 205 aaKnown RBP4.78□□□□□ -1.64
PTCD3-215ENST00000484203 LGALS1P09382 135 aaKnown RBP4.78□□□□□ -1.64
PTCD3-215ENST00000484203 GNB3P16520 340 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 HOXD3P31249 432 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-215ENST00000484203 CHRNA7P36544 502 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 CBX5P45973 191 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 OR10A3P58181 314 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 GNG2P59768 71 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 MSMO1Q15800 293 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 ECSCRQ19T08 205 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF260Q3ZCT1 412 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 KCTD21Q4G0X4 260 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 VAX1Q5SQQ9 334 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 CNIH2Q6PI25 160 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 SLC25A42Q86VD7 318 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF383Q8NA42 475 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 OR6Q1Q8NGQ2 317 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 RITA1Q96K30 269 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 HARBI1Q96MB7 349 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 HSD17B10Q99714 261 aaKnown RBP4.78□□□□□ -1.64
PTCD3-215ENST00000484203 SPIN2AQ99865 258 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 SPIN2BQ9BPZ2 258 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 KCNK15Q9H427 330 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 RANGRFQ9HD47 186 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-215ENST00000484203 DIABLOQ9NR28 239 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 SDHAF2Q9NX18 166 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 DAPK2Q9UIK4 370 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF256Q9Y2P7 627 aaPredicted RBP4.78□□□□□ -1.64
PTCD3-215ENST00000484203 KCNK7Q9Y2U2 307 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 OR2W1Q9Y3N9 320 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
PTCD3-215ENST00000484203 DSCAML1Q8TD84 2053 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 A0A075B6Q4 140 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GAGE12BA1L429 117 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GAGE12HA6NDE8 117 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 SLC25A17O43808 307 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 CA2P00918 260 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 TRGV3P03979 118 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GSTT2P0CG29 244 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GSTT2BP0CG30 244 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GCSHP23434 173 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 CNTFRP26992 372 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 KIR2DS2P43631 304 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 TPPP2P59282 170 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 UBE2KP61086 200 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 KIAA0141Q14154 515 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-215ENST00000484203 DEFB136Q30KP8 78 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 SFXN4Q6P4A7 337 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GLDNQ6ZMI3 551 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF66Q6ZN08 573 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 H1FOOQ8IZA3 346 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF645Q8N7E2 425 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 POC5Q8NA72 575 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 DRAXINQ8NBI3 349 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-215ENST00000484203 ZBTB34Q8NCN2 500 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 LFNGQ8NES3 379 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 GRPEL2Q8TAA5 225 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 CD300LFQ8TDQ1 290 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 OR4C12Q96R67 309 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 ST6GALNAC5Q9BVH7 336 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 PARP12Q9H0J9 701 aaKnown RBP4.77□□□□□ -1.65
PTCD3-215ENST00000484203 KLK15Q9H2R5 256 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF355PQ9NSJ1 428 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 RHBDL2Q9NX52 303 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 RRP15Q9Y3B9 282 aaKnown RBP4.77□□□□□ -1.65
PTCD3-215ENST00000484203 A3GALT2U3KPV4 340 aa4.77□□□□□ -1.65
PTCD3-215ENST00000484203 A0A087WXM4 84 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 A0A0B4J203 849 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 WI2-2373I1.2A0A1W2PRP0 233 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 H0Y980 276 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 FCN1O00602 326 aa4.76□□□□□ -1.65
PTCD3-215ENST00000484203 PROP1O75360 226 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms