RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 GPHA2Q96T91 129 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 NEURL2Q9BR09 285 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 RANBP3Q9H6Z4 567 aaPredicted RBP11.31□□□□□ -0.6
SMAD9-204ENST00000483941 CDC42EP3Q9UKI2 254 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 H0YJW9 148 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 WIPF1O43516 503 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 CD1BP29016 333 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 KLRD1Q13241 179 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 IAH1Q2TAA2 248 aaPredicted RBP11.3□□□□□ -0.6
SMAD9-204ENST00000483941 OR2B11Q5JQS5 317 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 COA4Q9NYJ1 87 aa11.3□□□□□ -0.6
SMAD9-204ENST00000483941 MEGF8Q7Z7M0 2845 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 SHOXO15266 292 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 RAMP3O60896 148 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 ADAP1O75689 374 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 CRYZL1O95825 349 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 KRASP01116 189 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 RLN2P04090 185 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 REG1BP48304 166 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 H2BFSP57053 126 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 POU2AF1Q16633 256 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 LHFPL5Q8TAF8 219 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 R3HDM4Q96D70 268 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 ST6GAL2Q96JF0 529 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 TSNAXQ99598 290 aaKnown RBP11.29□□□□□ -0.6
SMAD9-204ENST00000483941 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
SMAD9-204ENST00000483941 PRR13Q9NZ81 148 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 ZNRD1Q9P1U0 126 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 FAM96BQ9Y3D0 163 aa11.29□□□□□ -0.6
SMAD9-204ENST00000483941 S1PR2O95136 353 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 LY86O95711 162 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 FAM106CPP0CH98 169 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 RPS16P62249 146 aaKnown RBP11.28□□□□□ -0.6
SMAD9-204ENST00000483941 SSX2Q16385 188 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 ZFP69Q49AA0 526 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 C1orf229Q6ZS94 237 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-204ENST00000483941 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 OR2T35Q8NGX2 323 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-204ENST00000483941 FKBP11Q9NYL4 201 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 GSKIPQ9P0R6 139 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 HILPDAQ9Y5L2 63 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
SMAD9-204ENST00000483941 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 CCSO14618 274 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 SIX6O95475 246 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 HNRNPCP07910 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMAD9-204ENST00000483941 FGF2P09038 288 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 PSMB6P28072 239 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 SAA4P35542 130 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 DLX1P56177 255 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.61
SMAD9-204ENST00000483941 C2orf68Q2NKX9 166 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
SMAD9-204ENST00000483941 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 OR1S1Q8NH92 325 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 THAP6Q8TBB0 222 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 GPR146Q96CH1 333 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 RHOVQ96L33 236 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 HYLS1Q96M11 299 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
SMAD9-204ENST00000483941 FYTTD1Q96QD9 318 aaKnown RBP11.27□□□□□ -0.61
SMAD9-204ENST00000483941 MS4A7Q9GZW8 240 aaPredicted RBP11.27□□□□□ -0.61
SMAD9-204ENST00000483941 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 A0A1W2PPI3 338 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 A0A1W2PRD5 423 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 A0A1W2PRF3 423 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 A0A1W2PRM7 423 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 RBMXL2O75526 392 aaKnown RBP11.26□□□□□ -0.61
SMAD9-204ENST00000483941 MED6O75586 246 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 SPDEFO95238 335 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 IGKV1-39P01597 117 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 C1QBP02746 253 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 IGKV1D-39P04432 117 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 FBP1P09467 338 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
SMAD9-204ENST00000483941 G6PCP35575 357 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 NKX2-1P43699 371 aaPredicted RBP11.26□□□□□ -0.61
SMAD9-204ENST00000483941 DYNLT3P51808 116 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
SMAD9-204ENST00000483941 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 AANATQ16613 207 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 OR8H1Q8NGG4 311 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms