RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SCGB2B2Q4G0G5 96 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 OSR2Q8N2R0 312 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 OR13C8Q8NGS7 320 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF721Q8TF20 911 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 RBMXL1Q96E39 390 aaKnown RBP2.94□□□□□ -1.94
PTCD3-214ENST00000483925 L3HYPDHQ96EM0 354 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 DNAJC30Q96LL9 226 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 SERPINI1Q99574 410 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 TSSK6Q9BXA6 273 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 WDR61Q9GZS3 305 aaKnown RBP2.94□□□□□ -1.94
PTCD3-214ENST00000483925 PBOV1Q9GZY1 135 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 TMEM222Q9H0R3 208 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 LRTM1Q9HBL6 345 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 SPANXCQ9NY87 97 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 OR52A1Q9UKL2 312 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 SMAD5-AS1Q9Y6J3 95 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 ARHGEF10O15013 1369 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 ROBO3Q96MS0 1386 aa2.94□□□□□ -1.94
PTCD3-214ENST00000483925 TNS2Q63HR2 1409 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 SETD5Q9C0A6 1442 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 DYSFO75923 2080 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 TRBV20OR9-2A0A075B6H5 130 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 IGKV1-12A0A0C4DH73 117 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 EFCAB10A6NFE3 127 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 A8MUN3 132 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 ARPC5O15511 151 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 IGKV1D-12P01611 117 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 ADRA2AP08913 450 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF705DP0CH99 300 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-214ENST00000483925 SMIM10L2AP0DMW4 78 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 SMIM10L2BP0DMW5 78 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 SRP9P49458 86 aaKnown RBP2.93□□□□□ -1.94
PTCD3-214ENST00000483925 DEFA1P59665 94 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 TPI1P60174 286 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 RBX1P62877 108 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 FKBP1AP62942 108 aaKnown RBP2.93□□□□□ -1.94
PTCD3-214ENST00000483925 LPAL2Q16609 132 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 TNFAIP8L3Q5GJ75 292 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 UNQ9165/PRO28630Q6UXU0 137 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 Q6ZR03 302 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 MIR7-3HGQ8N6C7 128 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF615Q8N8J6 731 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 SLC7A6Q92536 515 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 STARD4Q96DR4 205 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 C1orf50Q9BV19 199 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 PLA2G12AQ9BZM1 189 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 GABARAPL1Q9H0R8 117 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 OR2D2Q9H210 308 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 MED29Q9NX70 200 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 FBXL12Q9NXK8 326 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 TVP23BQ9NYZ1 205 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 GSKIPQ9P0R6 139 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 SLC23A2Q9UGH3 650 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 PHLDA3Q9Y5J5 127 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 TRAPPC1Q9Y5R8 145 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 NCOA3Q9Y6Q9 1424 aa2.93□□□□□ -1.94
PTCD3-214ENST00000483925 ZNFX1Q9P2E3 1918 aaKnown RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 TRBV19A0A075B6N1 114 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 TRAV9-1A0A075B6T8 112 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 A0A0J9YY10 115 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 A0A1B0GX78 115 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 A0A1W2PRE2 83 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 DPRXA6NFQ7 191 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 ARL5CA6NH57 179 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 SIGLEC16A6NMB1 481 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF861PO60384 105 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 SRP19P09132 144 aaKnown RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 GLRXP35754 106 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 SERPINB10P48595 397 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 NOVP48745 357 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 CDC42P60953 191 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 TBPL1P62380 186 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 RHEBQ15382 184 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 CCDC58Q4VC31 144 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 WDR59Q6PJI9 974 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 H1FOOQ8IZA3 346 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 CYB561D1Q8N8Q1 229 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 ZFP62Q8NB50 900 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 OR11G2Q8NGC1 345 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 OR4K13Q8NH42 304 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 SGMS2Q8NHU3 365 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 LYSMD1Q96S90 227 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 SPIN2AQ99865 258 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 SPIN2BQ9BPZ2 258 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 CCDC32Q9BV29 185 aa2.92□□□□□ -1.94
PTCD3-214ENST00000483925 RSPO3Q9BXY4 272 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF230Q9UIE0 474 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 RPUSD1Q9UJJ7 312 aaKnown RBP2.92□□□□□ -1.94
PTCD3-214ENST00000483925 MIA3Q5JRA6 1907 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 CEP170Q5SW79 1584 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 HECW2Q9P2P5 1572 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 DENND4BO75064 1496 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-214ENST00000483925 LTBP1Q14766 1721 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 TRAV4A0A0B4J268 109 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 C9JCJ5 164 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 MED6O75586 246 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 PIAS1O75925 651 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 OR2J2O76002 312 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 LHBP01229 141 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 RPS4Y1P22090 263 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms