RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 MRPS18AQ9NVS2 196 aaKnown RBP10.97□□□□□ -0.65
HDAC6-224ENST00000481929 PLEKHJ1Q9NW61 149 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 SDHAF2Q9NX18 166 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 BABAM2Q9NXR7 383 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 UFC1Q9Y3C8 167 aa10.97□□□□□ -0.65
HDAC6-224ENST00000481929 RPL36Q9Y3U8 105 aaKnown RBP10.97□□□□□ -0.65
HDAC6-224ENST00000481929 PKD1P98161 4303 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 DPPA5A6NC42 116 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 CRYZL1O95825 349 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 ALPLP05186 524 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 MYOD1P15172 320 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 ETV1P50549 477 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 ELLP55199 621 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-224ENST00000481929 MED21Q13503 144 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 TPBGQ13641 420 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 C19orf35Q6ZS72 473 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 MMD2Q8IY49 270 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 CCDC197Q8NCU1 140 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 CD300LFQ8TDQ1 290 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 NICN1Q9BSH3 213 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 AK3Q9UIJ7 227 aa10.96□□□□□ -0.65
HDAC6-224ENST00000481929 IGKV1-6A0A0C4DH72 117 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 OR4C46A6NHA9 309 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 DEFB4AO15263 64 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 CDK10Q15131 360 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 LAMTOR1Q6IAA8 161 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 CEACAM19Q7Z692 300 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 NR2C2APQ86WQ0 139 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 SETD9Q8NE22 299 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 OR4A5Q8NH83 315 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 RHOXF1Q8NHV9 184 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 TM2D1Q9BX74 207 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 Q9N2K0 584 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 FGF20Q9NP95 211 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-224ENST00000481929 HSPG2P98160 4391 aa10.95□□□□□ -0.66
HDAC6-224ENST00000481929 IGHV4-4A0A075B6R2 117 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 NPIPB5A8MRT5 1133 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 M0R2N4 97 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 EI24O14681 340 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 LALBAP00709 142 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 SAA1P0DJI8 122 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-224ENST00000481929 SRMP19623 302 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 ADMP35318 185 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 ZFP41Q8N8Y5 198 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 OSR1Q8TAX0 266 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-224ENST00000481929 GGHQ92820 318 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 C5orf30Q96GV9 206 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 PGLYRP3Q96LB9 341 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 DERL3Q96Q80 235 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 C12orf4Q9NQ89 552 aa10.94□□□□□ -0.66
HDAC6-224ENST00000481929 TRBV7-1A0A0A6YYK4 115 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 TEX22C9J3V5 150 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 DHFRP00374 187 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 CLEC3BP05452 202 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 DCKP27707 260 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 PSMB6P28072 239 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 SERPINB10P48595 397 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 ADTRPQ96IZ2 230 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 FANCD2OSQ96PS1 177 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 HRH4Q9H3N8 390 aa10.93□□□□□ -0.66
HDAC6-224ENST00000481929 TRAV10A0A0B4J240 114 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 IGHV3-35A0A0C4DH35 117 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 TRDCB7Z8K6 153 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 HIST1H1BP16401 226 aaKnown RBP10.92□□□□□ -0.66
HDAC6-224ENST00000481929 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 MAPKAPK5-AS1Q8N8E1 139 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 SLC7A6OSQ96CW6 309 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-224ENST00000481929 FYTTD1Q96QD9 318 aaKnown RBP10.92□□□□□ -0.66
HDAC6-224ENST00000481929 KCNK15Q9H427 330 aa10.92□□□□□ -0.66
HDAC6-224ENST00000481929 A0A0A6YYD4 124 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 MFSD2BA6NFX1 497 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 BET1O15155 118 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 MYL12AP19105 171 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 GPR183P32249 361 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 DUTP33316 252 aaKnown RBP10.91□□□□□ -0.66
HDAC6-224ENST00000481929 RPL27AP46776 148 aaKnown RBP10.91□□□□□ -0.66
HDAC6-224ENST00000481929 UNC119Q13432 240 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 TTC23Q5W5X9 447 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 PLET1Q6UQ28 207 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 CENPSQ8N2Z9 138 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 OR4A4PQ8NGN8 299 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 CXorf58Q96LI9 332 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 RNF126Q9BV68 326 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 SLC2A9Q9NRM0 540 aa10.91□□□□□ -0.66
HDAC6-224ENST00000481929 RBM7Q9Y580 266 aaKnown RBP10.91□□□□□ -0.66
HDAC6-224ENST00000481929 PNMA8CA0A1B0GUJ8 204 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 LINC00473A8K010 186 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 SOCS1O15524 211 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-224ENST00000481929 CRYGCP07315 174 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 IL6RP08887 468 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-224ENST00000481929 CD3GP09693 182 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 P0DMU3 169 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
HDAC6-224ENST00000481929 DEFA4P12838 97 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms