RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MDC1Q14676 2089 aaKnown RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 A0A1B0GV72 72 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 SIGLEC16A6NMB1 481 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 LINC00587B1AMM8 73 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 SRSF10O75494 262 aaKnown RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 SOX14O95416 240 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 PPBPP02775 128 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 TGFBR1P36897 503 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 BTN3A2P78410 334 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CD47Q08722 323 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 ELP2Q6IA86 826 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 ZNF544Q6NX49 715 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 TMED4Q7Z7H5 227 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CLVS1Q8IUQ0 354 aaPredicted RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 C12orf29Q8N999 325 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 PLPP5Q8NEB5 264 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CT55Q8WUE5 264 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 GEMIN6Q8WXD5 167 aaKnown RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 QKIQ96PU8 341 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMC6-208ENST00000481708 LITAFQ99732 161 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 TMEM243Q9BU79 118 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 KRTAP4-5Q9BYR2 181 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 Q9H3A6 140 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 SND1-IT1Q9HBX3 110 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 ZNF230Q9UIE0 474 aaPredicted RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 COL7A1Q02388 2944 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 ANKHD1Q8IWZ3 2542 aaKnown RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 BMPR1BO00238 502 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 GPR31O00270 319 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 PLIN3O60664 434 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 TNFSF15O95150 251 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 INAFM2P0DMQ5 153 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CRABP1P29762 137 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 ZNF45Q02386 682 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 FAM162BQ5T6X4 162 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 OSR2Q8N2R0 312 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 TMEM252Q8N6L7 170 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 OR11A1Q9GZK7 315 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 FGF22Q9HCT0 170 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 F8P00451 2351 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 FN1P02751 2386 aaKnown RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 NUMA1Q14980 2115 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 IGHV7-81A0A0B4J1V7 117 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 IQCMA0A1B0GVH7 501 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 C19orf84I3L1E1 186 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 THY1P04216 161 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 RPS3P23396 243 aaKnown RBP eCLIP2.36□□□□□ -2.03
SMC6-208ENST00000481708 CHRNB4P30926 498 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 MTPNP58546 118 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 DEFA3P59666 94 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 FLI1Q01543 452 aaPredicted RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 GNA12Q03113 381 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 PAX8Q06710 450 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 ZNF404Q494X3 552 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 FAM71E1Q6IPT2 247 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 ZNF774Q6NX45 483 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 ACP7Q6ZNF0 438 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 C1orf158Q8N1D5 194 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 METTL27Q8N6F8 245 aaPredicted RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 ZFP62Q8NB50 900 aaPredicted RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 UTP11Q9Y3A2 253 aaKnown RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 TLCD2A6NGC4 264 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 C4orf51C9J302 202 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 PSPHP1O15172 72 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 IGKV2-30P06310 120 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 CFC1P0CG37 223 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 RPS20P60866 119 aaKnown RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 EDDM3AQ14507 147 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 IZUMO4Q1ZYL8 232 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 OAFQ86UD1 273 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 DOLPP1Q86YN1 238 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 EXOC3-AS1Q8N2X6 119 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 Q8N377 158 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 OR4P4Q8NGL7 312 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 VN1R17PQ8TDU5 208 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 C7orf33Q8WU49 177 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 DHRS9Q9BPW9 319 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 SULT4A1Q9BR01 284 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 ZNF717Q9BY31 904 aaPredicted RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 CENPEQ02224 2701 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 A0A0B4J2A0 478 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 FAM183AA6NL82 134 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 A8MXK9 166 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 NTN1O95631 604 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 IGHV3-23P01764 117 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 IGHMP01871 453 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 CD99P14209 185 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 CA5AP35218 305 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 CDKN2BP42772 138 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 CDK5Q00535 292 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 SHISA6Q6ZSJ9 500 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 EIF4E3Q8N5X7 224 aaKnown RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 OR2M7Q8NG81 312 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 OR9I1Q8NGQ6 314 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 PDXPQ96GD0 296 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 CHAC1Q9BUX1 264 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 EXOSC4Q9NPD3 245 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms