RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 C5orf30Q96GV9 206 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 NABP2Q9BQ15 211 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-213ENST00000481019 PRSS22Q9GZN4 317 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 C5orf66Q9H5L9 145 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 PLSCR3Q9NRY6 295 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 PIPOXQ9P0Z9 390 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 SHPKQ9UHJ6 478 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 A0A1B0GVG6 124 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 OR8U9P0C7N5 309 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 VAMP1P23763 118 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 CNTFRP26992 372 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 CD1BP29016 333 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 GNRHRP30968 328 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 ARHGDIBP52566 201 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 F2RL1P55085 397 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 CATR1Q13166 79 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 DHRS2Q13268 280 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 C16orf82Q7Z2V1 217 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-213ENST00000481019 ZNF645Q8N7E2 425 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 SLC2A9Q9NRM0 540 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 MOB4Q9Y3A3 225 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 MEGF8Q7Z7M0 2845 aa9.7□□□□□ -0.86
PTPRF-213ENST00000481019 CRYM-AS1A6NIL9 109 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 RAB29O14966 203 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 MPPED1O15442 326 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 ATG12O94817 140 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 SFT2D2O95562 160 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 CT45A6P0DMU7 189 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 CT45A5P0DMU8 189 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 CT45A7P0DMV0 189 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 CD28P10747 220 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 VDAC2P45880 294 aaPredicted RBP9.69□□□□□ -0.86
PTPRF-213ENST00000481019 ZNF66Q6ZN08 573 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 AKAP14Q86UN6 197 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 Q8N9W7 124 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 CD300LFQ8TDQ1 290 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 MITD1Q8WV92 249 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 MRGPRFQ96AM1 343 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 S1PR3Q99500 378 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 HSD17B10Q99714 261 aaKnown RBP9.69□□□□□ -0.86
PTPRF-213ENST00000481019 FXYD6Q9H0Q3 95 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 WNK1Q9H4A3 2382 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 NAA60Q9H7X0 242 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 FAM212BQ9NTI7 297 aaPredicted RBP9.69□□□□□ -0.86
PTPRF-213ENST00000481019 DNAH3Q8TD57 4116 aa9.69□□□□□ -0.86
PTPRF-213ENST00000481019 CCNKO75909 580 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 SNAPC5O75971 98 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 MOSP00540 346 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 IFNA21P01568 189 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 RPA2P15927 270 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 GPR12P47775 334 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 CYCSP99999 105 aaKnown RBP9.68□□□□□ -0.86
PTPRF-213ENST00000481019 TAGLNQ01995 201 aaKnown RBP9.68□□□□□ -0.86
PTPRF-213ENST00000481019 PPP1R1AQ13522 171 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 TCTEX1D4Q5JR98 221 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 C9orf152Q5JTZ5 239 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 DRAXINQ8NBI3 349 aaPredicted RBP9.68□□□□□ -0.86
PTPRF-213ENST00000481019 ADAD2Q8NCV1 583 aaKnown RBP9.68□□□□□ -0.86
PTPRF-213ENST00000481019 OR2T10Q8NGZ9 312 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 ADTRPQ96IZ2 230 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 CCL28Q9NRJ3 127 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 LIN7CQ9NUP9 197 aaKnown RBP9.68□□□□□ -0.86
PTPRF-213ENST00000481019 LINC00527Q9UJ94 153 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 PRELID3BQ9Y3B1 194 aa9.68□□□□□ -0.86
PTPRF-213ENST00000481019 C3orf85A0A1B0GTC6 90 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 DUXBA0A1W2PPF3 345 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 ADARB2-AS1A8MUL3 147 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 TXNL1O43396 289 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 PGLYRP1O75594 196 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-213ENST00000481019 TSPAN15O95858 294 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 SERPINE2P07093 398 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 KIR2DS2P43631 304 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 PHLDA2Q53GA4 152 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 PRR31Q5SQ13 230 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 FAM71F2Q6NXP2 309 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 ZNF818PQ6ZRF7 136 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 LGI3Q8N145 548 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 ZNF383Q8NA42 475 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 UXS1Q8NBZ7 420 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 SGMS2Q8NHU3 365 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 IL22RA2Q969J5 263 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 NOL4LQ96MY1 436 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-213ENST00000481019 HSPB9Q9BQS6 159 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 SEC22CQ9BRL7 303 aa9.67□□□□□ -0.86
PTPRF-213ENST00000481019 IGKV1D-13A0A0B4J2D9 117 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 NCBP2LA6PVI3 153 aaKnown RBP9.66□□□□□ -0.86
PTPRF-213ENST00000481019 H0Y980 276 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 H0YJW9 148 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 FGF16O43320 207 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 IGKV1-13P0DP09 117 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 HLA-GP17693 338 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 PI3P19957 117 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 518.7 ms