RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 LRRC42Q9Y546 428 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 DPPA5A6NC42 116 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 OR4C45A6NMZ5 311 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 EREGO14944 169 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 BAG2O95816 211 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 AREGP15514 252 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 ZNF85Q03923 595 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 FAM98BQ52LJ0 330 aaKnown RBP8.28□□□□□ -1.08
USP11-208ENST00000480104 NXNL2Q5VZ03 156 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 FDX2Q6P4F2 183 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
USP11-208ENST00000480104 CXorf58Q96LI9 332 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 OR14A2Q96R54 314 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 S100A13Q99584 98 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 Q9H8V8 135 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 TMBIM4Q9HC24 238 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 SMPD3Q9NY59 655 aaPredicted RBP8.28□□□□□ -1.08
USP11-208ENST00000480104 H2AFY2Q9P0M6 372 aaPredicted RBP8.28□□□□□ -1.08
USP11-208ENST00000480104 OR1A1Q9P1Q5 309 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 DKK2Q9UBU2 259 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 SMPXQ9UHP9 88 aa8.28□□□□□ -1.08
USP11-208ENST00000480104 IGHV3-49A0A0A0MS15 119 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 CHEK1O14757 476 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 DFFBO76075 338 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 CCR9P51686 369 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 CCL18P55774 89 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 CBX3Q13185 183 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 EDARADDQ8WWZ3 215 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 FYTTD1Q96QD9 318 aaKnown RBP8.27□□□□□ -1.09
USP11-208ENST00000480104 RHPN1-AS1Q9BWJ2 59 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 ARL8BQ9NVJ2 186 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 TAS2R4Q9NYW5 299 aa8.27□□□□□ -1.09
USP11-208ENST00000480104 IGLV11-55A0A075B6I3 123 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 KNCNA6PVL3 124 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 ZNF780AO75290 641 aaPredicted RBP8.26□□□□□ -1.09
USP11-208ENST00000480104 REG1AP05451 166 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 HTR1AP08908 422 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 GCSHP23434 173 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 MAS1LP35410 378 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 LINC00315P59091 139 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 USF2Q15853 346 aaPredicted RBP8.26□□□□□ -1.09
USP11-208ENST00000480104 KLK9Q2XQG4 91 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 FAM90A2PQ658T7 463 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 SIGIRRQ6IA17 410 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 MFSD4AQ8N468 514 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 ELAC2Q9BQ52 826 aaKnown RBP8.26□□□□□ -1.09
USP11-208ENST00000480104 KLK9Q9UKQ9 250 aa8.26□□□□□ -1.09
USP11-208ENST00000480104 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 RPS10-NUDT3A0A1W2PQS6 291 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 OR2T8A6NH00 312 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 K7EMT4 169 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 NDUFA4O00483 81 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 NUDT3O95989 172 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 DHFRP00374 187 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 CRYGCP07315 174 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 IL6RP08887 468 aaPredicted RBP8.25□□□□□ -1.09
USP11-208ENST00000480104 P0C879 139 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 DNAH10OSP0CZ25 163 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 SAA1P0DJI8 122 aaPredicted RBP8.25□□□□□ -1.09
USP11-208ENST00000480104 HSD17B1P14061 328 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 HIST1H1BP16401 226 aaKnown RBP8.25□□□□□ -1.09
USP11-208ENST00000480104 ZNF93P35789 620 aaPredicted RBP8.25□□□□□ -1.09
USP11-208ENST00000480104 CEACAM6P40199 344 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 IRF3Q14653 427 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 CYP2R1Q6VVX0 501 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 GID4Q8IVV7 300 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 CMTM3Q96MX0 182 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 TMEM70Q9BUB7 260 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 ZNF556Q9HAH1 456 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 Q9N2K0 584 aa8.25□□□□□ -1.09
USP11-208ENST00000480104 IGHV7-4-1A0A0J9YVY3 117 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 TMEM189A5PLL7 270 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 E7EUB6 86 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 CREBL2O60519 120 aaPredicted RBP8.24□□□□□ -1.09
USP11-208ENST00000480104 CRYZL1O95825 349 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 GLAP06280 429 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 PAFAH1B2P68402 229 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 PLA2G7Q13093 441 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 OXA1LQ15070 435 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 DDI2Q5TDH0 399 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 SSX7Q7RTT5 188 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 HS3ST5Q8IZT8 346 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 SVOPQ8N4V2 548 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 TMEM116Q8NCL8 245 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 PTX4Q96A99 478 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 IL4I1Q96RQ9 567 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 BANF2Q9H503 90 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 FNDC4Q9H6D8 234 aaPredicted RBP8.24□□□□□ -1.09
USP11-208ENST00000480104 ZNF586Q9NXT0 402 aa8.24□□□□□ -1.09
USP11-208ENST00000480104 WARS2Q9UGM6 360 aaKnown RBP8.24□□□□□ -1.09
USP11-208ENST00000480104 IGHV3OR16-13A0A075B7E8 117 aa8.23□□□□□ -1.09
USP11-208ENST00000480104 IGHV3-74A0A0B4J1X5 117 aa8.23□□□□□ -1.09
USP11-208ENST00000480104 C15orf62A8K5M9 175 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms