RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 UBE2KP61086 200 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 EIF4EBP1Q13541 118 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 FHL3Q13643 280 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 DIAPH2-AS1Q14236 149 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 GNMTQ14749 295 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 MMDQ15546 238 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 RTL8BQ17RB0 113 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 ACTBL2Q562R1 376 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 TCTEX1D4Q5JR98 221 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 VAX1Q5SQQ9 334 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 THOC7Q6I9Y2 204 aaKnown RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 LIN54Q6MZP7 749 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 CENPVQ7Z7K6 275 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 MOB3BQ86TA1 216 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF575Q86XF7 245 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 TEX45Q8NA69 505 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 OR5AU1Q8NGC0 362 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 OR5AP2Q8NGF4 316 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 OR52L2PQ8NGH6 319 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 OR10V1Q8NGI7 309 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 VSTM2AQ8TAG5 236 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 GPX8Q8TED1 209 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 IL1F10Q8WWZ1 152 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 FLYWCH2Q96CP2 140 aaKnown RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 UBE2E2Q96LR5 201 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 P2RX4Q99571 388 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 RASL11BQ9BPW5 248 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 MRPL20Q9BYC9 149 aaKnown RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 OR51J1Q9H342 316 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 HEYLQ9NQ87 328 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 NECAP2Q9NVZ3 263 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 SDHAF2Q9NX18 166 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 CCDC59Q9P031 241 aaKnown RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 KIAA1456Q9P272 454 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 MRPS7Q9Y2R9 242 aaKnown RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 NUBP2Q9Y5Y2 271 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 VWFP04275 2813 aa3.84□□□□□ -1.8
PTCD3-213ENST00000480102 ARHGAP32A7KAX9 2087 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 IGHV7-81A0A0B4J1V7 117 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 IGHV3-43A0A0B4J1X8 118 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 TRAV39A0A0B4J263 110 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PIGBOS1A0A0B4J2F0 54 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 LOC100506127A0A0U1RQW1 187 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 MEX3AA1L020 520 aaKnown RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PSMB11A5LHX3 300 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM235A6NFC5 223 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 HMX3A6NHT5 357 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 IGLV2-14P01704 120 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 IL6RP08887 468 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 GSTT2P0CG29 244 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 GSTT2BP0CG30 244 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 IGHV3-43DP0DP04 118 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 SLC2A2P11168 524 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 VDAC1P21796 283 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 AADACP22760 399 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PTBP1P26599 531 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PRSS3P35030 304 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 MAS1LP35410 378 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 MYCNOSP40205 109 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 INSL3P51460 131 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 RPL23AP62750 156 aaKnown RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 EGFEM1PQ0D2K5 195 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PLA2G7Q13093 441 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 CBX3Q13185 183 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 DCTN2Q13561 401 aaKnown RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 DYRK1AQ13627 763 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 ARFRP1Q13795 201 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 HES1Q14469 280 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM69Q5SWH9 247 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 IDNKQ5T6J7 187 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 LPCAT3Q6P1A2 487 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 Q6ZNX1 250 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 LINC00299Q6ZSB3 139 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 HSD17B13Q7Z5P4 300 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 GPR141Q7Z602 305 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PPP1R27Q86WC6 154 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 ARRDC1Q8N5I2 433 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF383Q8NA42 475 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 BEST4Q8NFU0 473 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 OR4A5Q8NH83 315 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 C4orf3Q8WVX3 66 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 LEAP2Q969E1 77 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF486Q96H40 463 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 CITED2Q99967 270 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 GINS4Q9BRT9 223 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 HDHD3Q9BSH5 251 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 NXF2Q9GZY0 626 aaKnown RBP3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PLEKHA2Q9HB19 425 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 TAS2R8Q9NYW2 309 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 OR1A1Q9P1Q5 309 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 CACFD1Q9UGQ2 172 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 SIGLEC9Q9Y336 463 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 PRELID3BQ9Y3B1 194 aa3.83□□□□□ -1.8
PTCD3-213ENST00000480102 DOCK11Q5JSL3 2073 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 TRGV11A0A075B6L2 103 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 TRAV18A0A075B6X5 111 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 A0A1W2PPE3 182 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 FAM172BPA6NC97 362 aa3.82□□□□□ -1.8
PTCD3-213ENST00000480102 NCBP2LA6PVI3 153 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms