RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 EFNB1P98172 346 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 CFHR1Q03591 330 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 CEND1Q8N111 149 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 PTPMT1Q8WUK0 201 aaPredicted RBP4.71□□□□□ -1.66
USF3-202ENST00000478658 WDYHV1Q96HA8 205 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 BCL2L10Q9HD36 194 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 TOMM7Q9P0U1 55 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 TINAGQ9UJW2 476 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 MPTX1A8MV57 137 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 TMEM229AB2RXF0 380 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 CCL21O00585 134 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 CRYBB3P26998 211 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 SMIM4Q8WVI0 70 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 EBF4Q9BQW3 602 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 METRNQ9UJH8 293 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ERG28Q9UKR5 140 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ZNF98A6NK75 572 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 TMEM14DPA8MWL7 114 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 CYB5R3P00387 301 aaPredicted RBP4.71□□□□□ -1.66
USF3-202ENST00000478658 COX5BP10606 129 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 APOBEC3AP31941 199 aaPredicted RBP4.71□□□□□ -1.66
USF3-202ENST00000478658 CD69Q07108 199 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 FAM166AQ6J272 317 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ZNF683Q8IZ20 524 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ORMDL3Q8N138 153 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ABHD12Q8N2K0 398 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 GP6Q9HCN6 339 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ERRFI1Q9UJM3 462 aaPredicted RBP4.71□□□□□ -1.66
USF3-202ENST00000478658 TRBV4-1A0A0J9YWV2 114 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 MYMXA0A1B0GTQ4 84 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 WTIPA6NIX2 430 aaPredicted RBP4.71□□□□□ -1.66
USF3-202ENST00000478658 ZGLP1P0C6A0 271 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 DPTQ07507 201 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ZNF345Q14585 488 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 WFDC3Q8IUB2 231 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ALG14Q96F25 216 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 SMIM2Q9BVW6 85 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 GNB1LQ9BYB4 327 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 RTN4RQ9BZR6 473 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 PILRAQ9UKJ1 303 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 TJP1Q07157 1748 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 SDHDO14521 159 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 TCF21O43680 179 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 PSG1P11464 419 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 LDLRAD2Q5SZI1 272 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 DCAF12L2Q5VW00 463 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ATP5L2Q7Z4Y8 100 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 ZNF645Q8N7E2 425 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 BADQ92934 168 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 DNAJC4Q9NNZ3 241 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 MMP17Q9ULZ9 603 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 PRR33A8MZF0 331 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 THY1P04216 161 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 ERCC8Q13216 396 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 IL15RAQ13261 267 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 B3GNT8Q7Z7M8 397 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 GLRX5Q86SX6 157 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 PLAC1Q9HBJ0 212 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 A0A0D9SEW6 157 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 LINC00518Q8N0U6 118 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 SPSB4Q96A44 273 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 ISL2Q96A47 359 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 CLEC7AQ9BXN2 247 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 MS4A8Q9BY19 250 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 PIK3C2BO00750 1634 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 FAM90A9PA6NNJ1 464 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 CD33P20138 364 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 LIM2P55344 173 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 WFDC11Q8NEX6 87 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 NRG4Q8WWG1 115 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 NCOR1P1Q9H4R4 102 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 PATJQ8NI35 1801 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 LMO7DNF2Z398 122 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 VENTXO95231 258 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 HLA-DQB1P01920 261 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 RPL36AP83881 106 aaKnown RBP4.7□□□□□ -1.66
USF3-202ENST00000478658 LAGE3Q14657 143 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 UBE2V2Q15819 145 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 LDLRAD3Q86YD5 345 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 SIRT6Q8N6T7 355 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
USF3-202ENST00000478658 SCN10AQ9Y5Y9 1956 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 FFAR1O14842 300 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 LINC00158P58513 81 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 C2orf68Q2NKX9 166 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 C20orf141Q9NUB4 165 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 RNF115Q9Y4L5 304 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 LOC105371242A0A075B767 164 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 TMEM202A6NGA9 273 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 CCL22O00626 93 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 TIMM23O14925 209 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 MUC1P15941 1255 aaPredicted RBP4.7□□□□□ -1.66
USF3-202ENST00000478658 ZNF77Q15935 545 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 KLF17Q5JT82 389 aaPredicted RBP4.7□□□□□ -1.66
USF3-202ENST00000478658 SPATA31B1PQ5VZV4 182 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 SHISA6Q6ZSJ9 500 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 MARCH3Q86UD3 253 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 HSPB9Q9BQS6 159 aa4.7□□□□□ -1.66
USF3-202ENST00000478658 ZFP64Q9NPA5 681 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms