RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 ZBTB34Q8NCN2 500 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 OR4S2Q8NH73 311 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 GRPEL2Q8TAA5 225 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 OSR1Q8TAX0 266 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-222ENST00000478095 SOSTQ9BQB4 213 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 RABL2AQ9UBK7 228 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-222ENST00000478095 RABL2BQ9UNT1 228 aa8.07□□□□□ -1.12
HDAC6-222ENST00000478095 TRAV41A0A0B4J266 112 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 GPR31O00270 319 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 ARPC1BO15143 372 aaKnown RBP8.06□□□□□ -1.12
HDAC6-222ENST00000478095 GSTZ1O43708 216 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-222ENST00000478095 PGLYRP1O75594 196 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-222ENST00000478095 CD74P04233 296 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 CRYGBP07316 175 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 CSF1P09603 554 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 SAA1P0DJI8 122 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-222ENST00000478095 PGAM2P15259 253 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 PI3P19957 117 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 TBPP20226 339 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 UBE2KP61086 200 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-222ENST00000478095 CD83Q01151 205 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 ZNF79Q15937 498 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 PRR31Q5SQ13 230 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 SSX9Q7RTT3 188 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 CCDC190Q86UF4 302 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 PPP1R27Q86WC6 154 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 ARRDC1Q8N5I2 433 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 FAM110DQ8TAY7 271 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-222ENST00000478095 ARPC1AQ92747 370 aa8.06□□□□□ -1.12
HDAC6-222ENST00000478095 S1PR2O95136 353 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 CNIH1O95406 144 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 OPN1MWP04001 364 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 ZNF735P0CB33 412 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 OPN1MW2P0DN77 364 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 OPN1MW3P0DN78 364 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 EGR2P11161 476 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-222ENST00000478095 RPA2P15927 270 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 KIR2DS2P43631 304 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 CFHR3Q02985 330 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 SSBP1Q04837 148 aaKnown RBP8.05□□□□□ -1.12
HDAC6-222ENST00000478095 FXYD3Q14802 87 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 TNXAQ16473 311 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 MRGPRG-AS1Q2M3A8 158 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 ZNF562Q6V9R5 426 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 LHFPL1Q86WI0 220 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 NDUFA11Q86Y39 141 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 CMTM1Q8IZ96 169 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 SLC38A6Q8IZM9 456 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 Q8N402 240 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 OR4C16Q8NGL9 310 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 OR6Q1Q8NGQ2 317 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 CASTOR1Q8WTX7 329 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 BORCS5Q969J3 196 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 R3HDM4Q96D70 268 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 THAP7Q9BT49 309 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-222ENST00000478095 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 GON7Q9BXV9 100 aa8.05□□□□□ -1.12
HDAC6-222ENST00000478095 TSSC4Q9Y5U2 329 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-222ENST00000478095 A0A1W2PN81 502 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 ANKRD20A5PA0PJZ0 165 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 DISC1C4P0D8 188 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
HDAC6-222ENST00000478095 AKAIN1P0CW23 69 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 APELAP0DMC3 54 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 CHRNA7P36544 502 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 UCP3P55916 312 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 MEF2DQ14814 521 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 PRSS8Q16651 343 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 SPANXN2Q5MJ10 180 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 C10orf55Q5SWW7 151 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 LPCAT3Q6P1A2 487 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 UNQ5815/PRO19632Q6UWF5 114 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 TBC1D26Q86UD7 250 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 COMMD1Q8N668 190 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 TEX45Q8NA69 505 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 POC5Q8NA72 575 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 LFNGQ8NES3 379 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 MARCH1Q8TCQ1 289 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 TRIM63Q969Q1 353 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 MRGPRFQ96AM1 343 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 RHOVQ96L33 236 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 ZNF430Q9H8G1 570 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-222ENST00000478095 SLC2A9Q9NRM0 540 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 ZNF580Q9UK33 172 aa8.04□□□□□ -1.12
HDAC6-222ENST00000478095 A6NHS1 94 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 NUDT19A8MXV4 375 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 RBFOX2O43251 390 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC6-222ENST00000478095 SOX15O60248 233 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 KBTBD11O94819 623 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 OR2A4O95047 310 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 HRASP01112 189 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 IGHG4P01861 327 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 PF4V1P10720 104 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 S100GP29377 79 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 PPIFP30405 207 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms