RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 FAM159AQ6UWV7 190 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 HACD2Q6Y1H2 254 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 DCXRQ7Z4W1 244 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 SPATA12Q7Z6I5 190 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 NRMQ8IXM6 262 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 MICU2Q8IYU8 434 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 FAM86B1Q8N7N1 296 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 YIPF7Q8N8F6 280 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 ZNF565Q8N9K5 539 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 OR10X1Q8NGY0 326 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.02□□□□□ -1.93
VPS50-214ENST00000477935 EMG1Q92979 244 aaKnown RBP3.02□□□□□ -1.93
VPS50-214ENST00000477935 SLAMF6Q96DU3 332 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 ASB9Q96DX5 294 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 PPP1R36Q96LQ0 422 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 MBOAT4Q96T53 435 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 FMO2Q99518 471 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 RARRES2Q99969 163 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 FGF23Q9GZV9 251 aaPredicted RBP3.02□□□□□ -1.93
VPS50-214ENST00000477935 ZC4H2Q9NQZ6 224 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 KBTBD11-OT1A0A1B0GTJ5 212 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 HSD17B6O14756 317 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 ARPC3O15145 178 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 TGOLN2O43493 480 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 SOX15O60248 233 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 SERF1AO75920 110 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 BAG2O95816 211 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 NFYBP25208 207 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 IL3RAP26951 378 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 ATP6V1E1P36543 226 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 POLR2JP52435 117 aaKnown RBP3.01□□□□□ -1.93
VPS50-214ENST00000477935 TPPP2P59282 170 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 RIPPLY1Q0D2K3 151 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 IL24Q13007 206 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 ACTBL2Q562R1 376 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 TEX30Q5JUR7 227 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 ZNF684Q5T5D7 378 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 MBOAT2Q6ZWT7 520 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 TRMT10CQ7L0Y3 403 aaKnown RBP3.01□□□□□ -1.93
VPS50-214ENST00000477935 RNF148Q8N7C7 305 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 TPRX1Q8N7U7 411 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 OR10A7Q8NGE5 316 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 OR8B12Q8NGG6 310 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 OR52B4Q8NGK2 314 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 OR13C2Q8NGS9 318 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 FAM81AQ8TBF8 368 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 DYNLRB2Q8TF09 96 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 NSMCE2Q96MF7 247 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 ZNF488Q96MN9 340 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 SPACA5Q96QH8 159 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 TM2D1Q9BX74 207 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 PKIBQ9C010 78 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 WFDC10AQ9H1F0 79 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 RNF167Q9H6Y7 350 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 LINC00574Q9H8X3 128 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 PARP11Q9NR21 331 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 DCAF13Q9NV06 445 aaKnown RBP3.01□□□□□ -1.93
VPS50-214ENST00000477935 MRPL22Q9NWU5 206 aaKnown RBP3.01□□□□□ -1.93
VPS50-214ENST00000477935 PSG11Q9UQ72 335 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 IER3IP1Q9Y5U9 82 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 LRP2P98164 4655 aa3.01□□□□□ -1.93
VPS50-214ENST00000477935 IGLV2-18A0A075B6J9 118 aa3□□□□□ -1.93
VPS50-214ENST00000477935 IGHV7-81A0A0B4J1V7 117 aa3□□□□□ -1.93
VPS50-214ENST00000477935 IGHV3-72A0A0B4J1Y9 119 aa3□□□□□ -1.93
VPS50-214ENST00000477935 ODAMA1E959 279 aa3□□□□□ -1.93
VPS50-214ENST00000477935 H3BUA1 57 aa3□□□□□ -1.93
VPS50-214ENST00000477935 CDC42EP2O14613 210 aa3□□□□□ -1.93
VPS50-214ENST00000477935 E2F6O75461 281 aa3□□□□□ -1.93
VPS50-214ENST00000477935 HAND1O96004 215 aa3□□□□□ -1.93
VPS50-214ENST00000477935 CD74P04233 296 aa3□□□□□ -1.93
VPS50-214ENST00000477935 CSN2P05814 226 aa3□□□□□ -1.93
VPS50-214ENST00000477935 BLVRAP53004 296 aa3□□□□□ -1.93
VPS50-214ENST00000477935 ZNF121P58317 390 aaPredicted RBP3□□□□□ -1.93
VPS50-214ENST00000477935 ADARB1P78563 741 aaKnown RBP3□□□□□ -1.93
VPS50-214ENST00000477935 DIAPH2-AS1Q14236 149 aa3□□□□□ -1.93
VPS50-214ENST00000477935 TRAM2Q15035 370 aa3□□□□□ -1.93
VPS50-214ENST00000477935 RPEL1Q2QD12 228 aa3□□□□□ -1.93
VPS50-214ENST00000477935 PLCXD3Q63HM9 321 aa3□□□□□ -1.93
VPS50-214ENST00000477935 ZNF562Q6V9R5 426 aa3□□□□□ -1.93
VPS50-214ENST00000477935 UBE2DNLQ8IWF7 75 aa3□□□□□ -1.93
VPS50-214ENST00000477935 Q8IYB0 196 aa3□□□□□ -1.93
VPS50-214ENST00000477935 C6orf223Q8N319 242 aa3□□□□□ -1.93
VPS50-214ENST00000477935 C14orf178Q8N769 122 aaPredicted RBP3□□□□□ -1.93
VPS50-214ENST00000477935 C8orf31Q8N9H6 132 aa3□□□□□ -1.93
VPS50-214ENST00000477935 TMEM104Q8NE00 496 aa3□□□□□ -1.93
VPS50-214ENST00000477935 OR2T4Q8NH00 348 aa3□□□□□ -1.93
VPS50-214ENST00000477935 TAMM41Q96BW9 452 aa3□□□□□ -1.93
VPS50-214ENST00000477935 FAM210BQ96KR6 192 aa3□□□□□ -1.93
VPS50-214ENST00000477935 CEP19Q96LK0 163 aa3□□□□□ -1.93
VPS50-214ENST00000477935 PRRC1Q96M27 445 aa3□□□□□ -1.93
VPS50-214ENST00000477935 NMNAT3Q96T66 252 aa3□□□□□ -1.93
VPS50-214ENST00000477935 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
VPS50-214ENST00000477935 C6orf62Q9GZU0 229 aaPredicted RBP3□□□□□ -1.93
VPS50-214ENST00000477935 CHST6Q9GZX3 395 aa3□□□□□ -1.93
VPS50-214ENST00000477935 NCOR1P1Q9H4R4 102 aa3□□□□□ -1.93
VPS50-214ENST00000477935 ISG20L2Q9H9L3 353 aaKnown RBP3□□□□□ -1.93
VPS50-214ENST00000477935 RPRD1BQ9NQG5 326 aaKnown RBP3□□□□□ -1.93
VPS50-214ENST00000477935 SLC25A37Q9NYZ2 338 aa3□□□□□ -1.93
VPS50-214ENST00000477935 PEF1Q9UBV8 284 aaKnown RBP3□□□□□ -1.93
VPS50-214ENST00000477935 NUBP2Q9Y5Y2 271 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms