RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TLE4Q04727 773 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 ZNF273Q14593 569 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 RPL39P5Q59GN2 51 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 AKR1C8PQ5T2L2 129 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 PXDC1Q5TGL8 231 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 SLC25A24Q6NUK1 477 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 DUX4L9Q6RFH8 374 aaPredicted RBP6.51□□□□□ -1.37
VMA21-203ENST00000477649 PDPNQ86YL7 162 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 TGIF2LYQ8IUE0 185 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 ODF3L1Q8IXM7 274 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 LILRB2Q8N423 598 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 OR10P1Q8NGE3 313 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 OR5AN1Q8NGI8 311 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 OR10X1Q8NGY0 326 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 RHOVQ96L33 236 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 PBDC1Q9BVG4 233 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 TMEM147Q9BVK8 224 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 WFDC1Q9HC57 220 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 SLC35D1Q9NTN3 355 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 BET1LQ9NYM9 111 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 CTSZQ9UBR2 303 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 FOXA2Q9Y261 457 aaPredicted RBP6.51□□□□□ -1.37
VMA21-203ENST00000477649 AMMECR1Q9Y4X0 333 aaPredicted RBP6.51□□□□□ -1.37
VMA21-203ENST00000477649 DYSFO75923 2080 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 SPTA1P02549 2419 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 TANC2Q9HCD6 1990 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 A0A1B0GW64 132 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 FNDC10F2Z333 226 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 M0R1W7 72 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 SLC31A2O15432 143 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 PPIHO43447 177 aaKnown RBP6.5□□□□□ -1.37
VMA21-203ENST00000477649 FBXO24O75426 580 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 CST7O76096 145 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 TSPAN15O95858 294 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 IFNA17P01571 189 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 MBP02144 154 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 PRH1P02810 166 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 LIPFP07098 398 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 COL8A2P25067 703 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 ATP6V0CP27449 155 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 LGALS7P47929 136 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 CAMLGP49069 296 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 ERVFRD-1P60508 538 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 HSPE1P61604 102 aaKnown RBP6.5□□□□□ -1.37
VMA21-203ENST00000477649 RAB11AP62491 216 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 CLINT1Q14677 625 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 CDSNQ15517 529 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 LRRC75BQ2VPJ9 315 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 TMEM177Q53S58 311 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 OR2B11Q5JQS5 317 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 SPANXN5Q5MJ07 72 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 BTNL8Q6UX41 500 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 LYPD2Q6UXB3 125 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 ZNF841Q6ZN19 808 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 C1orf122Q6ZSJ8 110 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 CENPVQ7Z7K6 275 aaPredicted RBP6.5□□□□□ -1.37
VMA21-203ENST00000477649 MRPL41Q8IXM3 137 aaKnown RBP6.5□□□□□ -1.37
VMA21-203ENST00000477649 ZNF383Q8NA42 475 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 HSD17B11Q8NBQ5 300 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 LY6G5BQ8NDX9 201 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 BEND2Q8NDZ0 799 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 OR2G3Q8NGZ4 309 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 OR5B3Q8NH48 314 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 PCNPQ8WW12 178 aaKnown RBP6.5□□□□□ -1.37
VMA21-203ENST00000477649 RNF5Q99942 180 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 TMEM133Q9H2Q1 129 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 ENY2Q9NPA8 101 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 KCNIP2Q9NS61 270 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 TMEM140Q9NV12 185 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 PLCE1Q9P212 2302 aa6.5□□□□□ -1.37
VMA21-203ENST00000477649 TRAV1-1A0A0B4J248 108 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 A6NNC1 897 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 C17orf112F2Z3M2 114 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 CRYZL1O95825 349 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 F12P00748 615 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 ARG1P05089 322 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 IL6RP08887 468 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 CT45A6P0DMU7 189 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 CT45A5P0DMU8 189 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 CT45A7P0DMV0 189 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 IAPPP10997 89 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 CCL3L1P16619 93 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 M6PRP20645 277 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 USF1P22415 310 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 GNG10P50151 68 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 EFNA4P52798 201 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 DVL1P1P54792 670 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 RELBQ01201 579 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 PEA15Q15121 130 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 IZUMO4Q1ZYL8 232 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 VWC2Q2TAL6 325 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 WDR25Q64LD2 544 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 FAM53AQ6NSI3 398 aaPredicted RBP6.49□□□□□ -1.37
VMA21-203ENST00000477649 Q6ZRG5 221 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 ZNF295-AS1Q8N0V1 137 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 ABHD12Q8N2K0 398 aa6.49□□□□□ -1.37
VMA21-203ENST00000477649 KIR3DL3Q8N743 410 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms