RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SLC25A42Q86VD7 318 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 Q8N9W7 124 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 OR4X2Q8NGF9 303 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 MARCH1Q8TCQ1 289 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF431Q8TF32 576 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-221ENST00000477561 MOB3AQ96BX8 217 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF486Q96H40 463 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-221ENST00000477561 S1PR3Q99500 378 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 RASL11BQ9BPW5 248 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 NABP2Q9BQ15 211 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 GHITMQ9H3K2 345 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 PLSCR3Q9NRY6 295 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 RNF150Q9ULK6 438 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 IGKV1-6A0A0C4DH72 117 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 TUSC2O75896 110 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 IGHG2P01859 326 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 OR4E1P0C645 316 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 PF4V1P10720 104 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 AADACP22760 399 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 NFYAP23511 347 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-221ENST00000477561 GPR12P47775 334 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 FXYD4P59646 89 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 TMEM128Q5BJH2 165 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF833PQ6ZTB9 187 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 H1FOOQ8IZA3 346 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-221ENST00000477561 CCDC71LQ8N9Z2 235 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 OR4F17Q8NGA8 305 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 MRGPRFQ96AM1 343 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 OR4F4Q96R69 305 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 HSPB9Q9BQS6 159 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 FXYD6Q9H0Q3 95 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 IFI27L2Q9H2X8 130 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 C5orf66Q9H5L9 145 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 LIN7CQ9NUP9 197 aaKnown RBP6.53□□□□□ -1.36
HDAC6-221ENST00000477561 OR2W1Q9Y3N9 320 aa6.53□□□□□ -1.36
HDAC6-221ENST00000477561 TSSC4Q9Y5U2 329 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-221ENST00000477561 NOTCH1P46531 2555 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 RAB29O14966 203 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 CCNKO75909 580 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 HLA-AP01891 365 aaKnown RBP6.52□□□□□ -1.37
HDAC6-221ENST00000477561 PRB2P02812 416 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-221ENST00000477561 CT45A6P0DMU7 189 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 CT45A5P0DMU8 189 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 CT45A7P0DMV0 189 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 ANXA3P12429 323 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 AKR1C4P17516 323 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 LUMP51884 338 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-221ENST00000477561 LINC00205P59089 165 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 DHODHQ02127 395 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 MMDQ15546 238 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 OXLD1Q5BKU9 147 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 LY6G6FQ5SQ64 297 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 C18orf65Q6ZTR6 163 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 LYG2Q86SG7 212 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 FOXRED2Q8IWF2 684 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 SGPP2Q8IWX5 399 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 CMTM1Q8IZ96 169 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 STPG2Q8N412 459 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 FAM71E2Q8N5Q1 922 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 DRAXINQ8NBI3 349 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-221ENST00000477561 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 PHB2Q99623 299 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 NEURL2Q9BR09 285 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-221ENST00000477561 RSRP1Q9BUV0 290 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 SLC5A7Q9GZV3 580 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 TOLLIPQ9H0E2 274 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 RDH8Q9NYR8 311 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 PIPOXQ9P0Z9 390 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 KCNIP3Q9Y2W7 256 aa6.52□□□□□ -1.37
HDAC6-221ENST00000477561 RBM7Q9Y580 266 aaKnown RBP6.52□□□□□ -1.37
HDAC6-221ENST00000477561 A0A0B4J2A0 478 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 PIGBOS1A0A0B4J2F0 54 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 TEX13DA0A0J9YY54 714 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-221ENST00000477561 C9orf170A2RU37 121 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 H7C2Y5 167 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 AP4M1O00189 453 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 GPR31O00270 319 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SLC22A5O76082 557 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SFT2D2O95562 160 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 DUS4LO95620 317 aaKnown RBP6.51□□□□□ -1.37
HDAC6-221ENST00000477561 PF4P02776 101 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 HNRNPCP07910 306 aaKnown RBP eCLIP6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SULT1A3P0DMM9 295 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SULT1A4P0DMN0 295 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 CD33P20138 364 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 VAMP1P23763 118 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 PIGPP57054 158 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 RND3P61587 244 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SLC35B1P78383 322 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 DHRS2Q13268 280 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 PPP1R1AQ13522 171 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 FCN2Q15485 313 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 MSMO1Q15800 293 aa6.51□□□□□ -1.37
HDAC6-221ENST00000477561 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-221ENST00000477561 SAMD5Q5TGI4 173 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms