RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ZNF645Q8N7E2 425 aa13.72□□□□□ -0.21
EPHB4-204ENST00000477446 OR1L1Q8NH94 360 aa13.72□□□□□ -0.21
EPHB4-204ENST00000477446 NANPQ8TBE9 248 aa13.72□□□□□ -0.21
EPHB4-204ENST00000477446 TMED6Q8WW62 240 aa13.72□□□□□ -0.21
EPHB4-204ENST00000477446 C11orf1Q9H5F2 150 aa13.72□□□□□ -0.21
EPHB4-204ENST00000477446 IDI2-AS1Q9NZ38 188 aa13.72□□□□□ -0.21
EPHB4-204ENST00000477446 IGHV3OR16-10A0A075B7F0 116 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 TRAV40A0A0B4J280 105 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 CENPVL3A0A0U1RRI6 287 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 SPINT2O43291 252 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 TNFSF12O43508 249 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 ATG12O94817 140 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 FSHBP01225 129 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 IGLV2-14P01704 120 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 OR8U9P0C7N5 309 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 IGHV4-38-2P0DP08 117 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 SULT1A2P50226 295 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 NCR3LG1Q68D85 454 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 OR8U1Q8NH10 309 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 TMEM133Q9H2Q1 129 aa13.71□□□□□ -0.21
EPHB4-204ENST00000477446 F2RL2O00254 374 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 PITX3O75364 302 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 SEC11BP0C7V7 166 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 M6PRP20645 277 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 HNF1AP20823 631 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 NFYBP25208 207 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 UTF1Q5T230 341 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 OR51H1Q8NH63 302 aa13.71□□□□□ -0.22
EPHB4-204ENST00000477446 TEP1Q99973 2627 aaKnown RBP13.7□□□□□ -0.22
EPHB4-204ENST00000477446 WRBO00258 174 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 COX7A1P24310 79 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 LOXL3P58215 753 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 BAXQ07812 192 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 CATR1Q13166 79 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
EPHB4-204ENST00000477446 IL34Q6ZMJ4 242 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 PNKDQ8N490 385 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 DRAM1Q8N682 238 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 TEX29Q8N6K0 151 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 SMIM8Q96KF7 97 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 GINS3Q9BRX5 216 aa13.7□□□□□ -0.22
EPHB4-204ENST00000477446 LYRM2Q9NU23 88 aaPredicted RBP13.7□□□□□ -0.22
EPHB4-204ENST00000477446 NSD1Q96L73 2696 aaPredicted RBP13.69□□□□□ -0.22
EPHB4-204ENST00000477446 A0A087X0M5 115 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 IGHV2-26A0A0B4J1V2 119 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 IGHV3-43A0A0B4J1X8 118 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 A0A1B0GX30 115 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 ZNF705EA8MWA4 302 aaPredicted RBP13.69□□□□□ -0.22
EPHB4-204ENST00000477446 IGHV1-69P01742 117 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 IGHV3-43DP0DP04 118 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 RAB5CP51148 216 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 UBE2E1P51965 193 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 ZNF266Q14584 549 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 FAM219AQ8IW50 185 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 OR13D1Q8NGV5 346 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 RNASE11Q8TAA1 199 aaKnown RBP13.69□□□□□ -0.22
EPHB4-204ENST00000477446 EDARADDQ8WWZ3 215 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 LEAP2Q969E1 77 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 GPR146Q96CH1 333 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 RAB40CQ96S21 281 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
EPHB4-204ENST00000477446 A0A1W2PRD5 423 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 A0A1W2PRF3 423 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 A0A1W2PRM7 423 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 CRYZL1O95825 349 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 IGHV3-7P01780 117 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 SRP14P37108 136 aaKnown RBP13.68□□□□□ -0.22
EPHB4-204ENST00000477446 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
EPHB4-204ENST00000477446 EWSR1Q01844 656 aaKnown RBP eCLIP13.68□□□□□ -0.22
EPHB4-204ENST00000477446 CXorf66Q5JRM2 361 aaPredicted RBP13.68□□□□□ -0.22
EPHB4-204ENST00000477446 RUSC1-AS1Q66K80 236 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 BRD3OSQ6XYD6 125 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 ZNF66Q6ZN08 573 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 OR52L2PQ8NGH6 319 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 OR1S2Q8NGQ3 325 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 LINC00052Q96N35 136 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 CLEC7AQ9BXN2 247 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 PARP11Q9NR21 331 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 GFOD1Q9NXC2 390 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 ANK3Q12955 4377 aaKnown RBP13.68□□□□□ -0.22
EPHB4-204ENST00000477446 MTORP42345 2549 aa13.68□□□□□ -0.22
EPHB4-204ENST00000477446 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 RPL23AP62750 156 aaKnown RBP13.67□□□□□ -0.22
EPHB4-204ENST00000477446 TMEM30BQ3MIR4 351 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 OR11H6Q8NGC7 330 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 GPHA2Q96T91 129 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 COA4Q9NYJ1 87 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 JPT1Q9UK76 154 aa13.67□□□□□ -0.22
EPHB4-204ENST00000477446 FN1P02751 2386 aaKnown RBP13.67□□□□□ -0.22
EPHB4-204ENST00000477446 TUSC1Q2TAM9 212 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 ZNF585BQ52M93 769 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 PSG11Q9UQ72 335 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms