RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PP6455Q8WZ26 134 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 PIGCQ92535 297 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 BORCS8Q96FH0 119 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 AQP10Q96PS8 301 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 CMSS1Q9BQ75 279 aaKnown RBP3.46□□□□□ -1.86
VPS13D-206ENST00000476045 SULT4A1Q9BR01 284 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 CHST5Q9GZS9 411 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 TLNRD1Q9H1K6 362 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 RHOFQ9HBH0 211 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 WFDC1Q9HC57 220 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 ESM1Q9NQ30 184 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.46□□□□□ -1.86
VPS13D-206ENST00000476045 C1orf123Q9NWV4 160 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 RNF7Q9UBF6 113 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 KAAG1Q9UBP8 84 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 DNAJB11Q9UBS4 358 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 MLXQ9UH92 298 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 RCL1Q9Y2P8 373 aaKnown RBP3.46□□□□□ -1.86
VPS13D-206ENST00000476045 STARD10Q9Y365 291 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 PRELID3BQ9Y3B1 194 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 PPIAL4AQ9Y536 164 aa3.46□□□□□ -1.86
VPS13D-206ENST00000476045 IGKV1-12A0A0C4DH73 117 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 KIR2DS1A0A191URI9 304 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 A0A1B0GV50 99 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 FAM90A20PA6NIJ5 464 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TMEM210A6NLX4 147 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CD300LBA8K4G0 201 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 C9JQL5 133 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 H7C2Y5 167 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 M0QZ24 198 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TAAR5O14804 337 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TIMM23O14925 209 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 GPR137BO60478 399 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CA11O75493 328 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CST4P01036 141 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 NRASP01111 189 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 IGKV1D-12P01611 117 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 MBPP02686 304 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CRYBA1P05813 215 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 FCGR3AP08637 254 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 OR5AC1P0C628 307 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SFTA3P0C7M3 94 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 OR8U9P0C7N5 309 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 PET100P0DJ07 73 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 PRKACAP17612 351 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 AADACP22760 399 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CHATP28329 748 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CD80P33681 288 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CFHR2P36980 270 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 GLP1RP43220 463 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SULT1A2P50226 295 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 PIGPP57054 158 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 HERV-K104P61576 105 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 FLI1Q01543 452 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF92Q03936 586 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 PDZK1IP1Q13113 114 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TMEM187Q14656 261 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 ARL6IP1Q15041 203 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SURF2Q15527 256 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 FAM76BQ5HYJ3 339 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 KLF17Q5JT82 389 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TEX36Q5VZQ5 186 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 PLCXD3Q63HM9 321 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 WDR25Q64LD2 544 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 NCR3LG1Q68D85 454 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 DHRS7BQ6IAN0 325 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 EIF5AL1Q6IS14 154 aaKnown RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 LYZL2Q7Z4W2 148 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SPAG16Q8N0X2 631 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 OSR2Q8N2R0 312 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CCDC54Q8NEL0 328 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 OR56B2PQ8NGI1 322 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 OR10Z1Q8NGY1 313 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 OR8U1Q8NH10 309 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 ABHD5Q8WTS1 349 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SPSB1Q96BD6 273 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SAT2Q96F10 170 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TECTBQ96PL2 329 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 NRIP2Q9BQI9 281 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 RTL8AQ9BWD3 113 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 PAPOLGQ9BWT3 736 aaKnown RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 NAA60Q9H7X0 242 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 TAF9BQ9HBM6 251 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF286AQ9HBT8 521 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 NECAP2Q9NVZ3 263 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 RCC2Q9P258 522 aaKnown RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 ANXA10Q9UJ72 324 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 SLC7A11Q9UPY5 501 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 CARHSP1Q9Y2V2 147 aaKnown RBP3.45□□□□□ -1.86
VPS13D-206ENST00000476045 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
VPS13D-206ENST00000476045 BORCS7-ASMTA0A0B4J1R7 106 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 hCG_38984A0A1B0GV85 526 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 FAM24AA6NFZ4 105 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 LINC00473A8K010 186 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 E5RGE8 158 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 TRAPPC2LH3BP13 241 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SLC33A1O00400 549 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-206ENST00000476045 HSD17B6O14756 317 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 TNFRSF13BO14836 293 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms