RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SAA2-SAA4A0A096LPE2 208 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 SAA2P0DJI9 122 aaPredicted RBP11.62□□□□□ -0.55
UBXN11-214ENST00000475591 SELENOVP59797 346 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 ZNF561Q8N587 486 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 OR10G4Q8NGN3 311 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 OR10G9Q8NGN4 311 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 OR10G7Q8NGN6 311 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
UBXN11-214ENST00000475591 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
UBXN11-214ENST00000475591 CXCL1P09341 107 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 ATP6V1FQ16864 119 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
UBXN11-214ENST00000475591 OR4A16Q8NH70 328 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 Q8WTZ3 238 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 S1PR3Q99500 378 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 GFOD1Q9NXC2 390 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 APC2O95996 2303 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 ACACAQ13085 2346 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 KBTBD11-OT1A0A1B0GTJ5 212 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 RRHO14718 337 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 DDB2Q92466 427 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 SDSLQ96GA7 329 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 SEBOXQ9HB31 216 aaPredicted RBP11.61□□□□□ -0.55
UBXN11-214ENST00000475591 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
UBXN11-214ENST00000475591 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
UBXN11-214ENST00000475591 DPRXA6NFQ7 191 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 MYOD1P15172 320 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 CD81P60033 236 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 RELBQ01201 579 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 MRGPRGQ86SM5 289 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 Q8N7P7 452 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 PTPRZ1P23471 2315 aaPredicted RBP11.6□□□□□ -0.55
UBXN11-214ENST00000475591 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 TGIF2-C20orf24A0A0A6YYL0 155 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 SMCO3A2RU48 225 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 C5orf52A6NGY3 159 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 PRRG2O14669 202 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 IFNA10P01566 189 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 THBDP07204 575 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 GNB2P62879 340 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 ELOBQ15370 118 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 VWC2Q2TAL6 325 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 SLC35E3Q7Z769 313 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 LYG1Q8N1E2 194 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 ABHD12Q8N2K0 398 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 TMEM170AQ8WVE7 144 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 ZNF251Q9BRH9 671 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 RELNP78509 3460 aa11.6□□□□□ -0.55
UBXN11-214ENST00000475591 DYSFO75923 2080 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ZNF98A6NK75 572 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 C16orf97H3BN30 126 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 NQO2P16083 231 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 RPS10P46783 165 aaKnown RBP11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ERVK-16P61578 105 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 BSPH1Q075Z2 132 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 FOXC1Q12948 553 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 TMEM108Q6UXF1 575 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 RBM14Q96PK6 669 aaKnown RBP11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ROS1P08922 2347 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 S100A6P06703 90 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 OR4A8P0C604 315 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 MDKP21741 143 aaPredicted RBP11.59□□□□□ -0.55
UBXN11-214ENST00000475591 COL8A2P25067 703 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 SPCS3P61009 180 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ADIPOQQ15848 244 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ZNF674Q2M3X9 581 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 GFRALQ6UXV0 394 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 RBMS3Q6XE24 437 aaKnown RBP11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ZNF788Q6ZQV5 615 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 ZNF383Q8NA42 475 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 RAB24Q969Q5 203 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 C12orf57Q99622 126 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 SSX3Q99909 188 aa11.59□□□□□ -0.55
UBXN11-214ENST00000475591 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
UBXN11-214ENST00000475591 A0A087WWC5 75 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 TMPRSS2O15393 492 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 TNFSF4P23510 183 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 CD1BP29016 333 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 MAS1LP35410 378 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 VDAC2P45880 294 aaPredicted RBP11.58□□□□□ -0.56
UBXN11-214ENST00000475591 AARDQ4LEZ3 155 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 ZNF709Q8N972 641 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 PCNX1Q96RV3 2341 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
UBXN11-214ENST00000475591 TANC2Q9HCD6 1990 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
UBXN11-214ENST00000475591 GFRA3O60609 400 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 NDUFB7P17568 137 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 MRPS11P82912 194 aaKnown RBP11.58□□□□□ -0.56
UBXN11-214ENST00000475591 FABP9Q0Z7S8 132 aa11.58□□□□□ -0.56
UBXN11-214ENST00000475591 ZNF439Q8NDP4 499 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms