RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RAMP3O60896 148 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 F2RP25116 425 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 ECI1P42126 302 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 NDPQ00604 133 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 ZNF45Q02386 682 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 PYDC2Q56P42 97 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 NOL4LQ96MY1 436 aaPredicted RBP13.31□□□□□ -0.28
SCAF11-206ENST00000474828 GON7Q9BXV9 100 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 PLEKHA2Q9HB19 425 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 TPSG1Q9NRR2 321 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 NUBP2Q9Y5Y2 271 aa13.31□□□□□ -0.28
SCAF11-206ENST00000474828 TNFSF12O43508 249 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 HPRT1P00492 218 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 IGHG4P01861 327 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 TAS2R31P59538 309 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 PRR31Q5SQ13 230 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 CENPVQ7Z7K6 275 aaPredicted RBP13.3□□□□□ -0.28
SCAF11-206ENST00000474828 SPAG16Q8N0X2 631 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 MINDY2Q8NBR6 621 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 OR13C8Q8NGS7 320 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 SGMS2Q8NHU3 365 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 PRRT1Q99946 306 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 AIFM2Q9BRQ8 373 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 SLC2A9Q9NRM0 540 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
SCAF11-206ENST00000474828 PSMB11A5LHX3 300 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 DISC1C4P0D8 188 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 ARPC1BO15143 372 aaKnown RBP13.29□□□□□ -0.28
SCAF11-206ENST00000474828 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 PEX14O75381 377 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 FBXO24O75426 580 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 SAA1P0DJI8 122 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-206ENST00000474828 CD28P10747 220 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 PRSS8Q16651 343 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 VMA21Q3ZAQ7 101 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 AKIRIN2Q53H80 203 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 ARSJQ5FYB0 599 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-206ENST00000474828 FAAP20Q6NZ36 180 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 C10orf99Q6UWK7 81 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 MYOZ3Q8TDC0 251 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 RHOVQ96L33 236 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 AKIP1Q9NQ31 210 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 COMMD9Q9P000 198 aa13.29□□□□□ -0.28
SCAF11-206ENST00000474828 BRI3O95415 125 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 CA2P00918 260 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 HRASP01112 189 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 RLN1P04808 185 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-206ENST00000474828 AP3S2P59780 193 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 PJVKQ0ZLH3 352 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 BAK1Q16611 211 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 NDUFA11Q86Y39 141 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 TMEM167AQ8TBQ9 72 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 ZFAND1Q8TCF1 268 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 HRASLSQ9HDD0 168 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 BET1LQ9NYM9 111 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 GPR132Q9UNW8 380 aa13.28□□□□□ -0.28
SCAF11-206ENST00000474828 MPPED1O15442 326 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 PSMB8P28062 276 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 SLC35B1P78383 322 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 FOXE3Q13461 319 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 OR2B11Q5JQS5 317 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 TBC1D26Q86UD7 250 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 POC5Q8NA72 575 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 OR51S1Q8NGJ8 323 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 OR51H1Q8NH63 302 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 OR4A5Q8NH83 315 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 CITED2Q99967 270 aaPredicted RBP13.27□□□□□ -0.29
SCAF11-206ENST00000474828 RTBDNQ9BSG5 229 aaPredicted RBP13.27□□□□□ -0.29
SCAF11-206ENST00000474828 LINC00527Q9UJ94 153 aa13.27□□□□□ -0.29
SCAF11-206ENST00000474828 TRAV41A0A0B4J266 112 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 CREBL2O60519 120 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-206ENST00000474828 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 KBTBD11O94819 623 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 OR2A4O95047 310 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 ELANEP08246 267 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 NQO2P16083 231 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 S100GP29377 79 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 PLGLAQ15195 96 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 PHLDA2Q53GA4 152 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 TEX38Q6PEX7 206 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 MMD2Q8IY49 270 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 CMYA5Q8N3K9 4069 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 MARCH1Q8TCQ1 289 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 TMEM68Q96MH6 324 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 OR2A7Q96R45 310 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 C5orf66Q9H5L9 145 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 ZNF430Q9H8G1 570 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-206ENST00000474828 ZFP57Q9NU63 452 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 SCP2D1Q9UJQ7 156 aa13.26□□□□□ -0.29
SCAF11-206ENST00000474828 G3V318 75 aa13.25□□□□□ -0.29
SCAF11-206ENST00000474828 SOX15O60248 233 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms