RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 BVESQ8NE79 360 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 RNF5Q99942 180 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 THAP7Q9BT49 309 aaPredicted RBP11.83□□□□□ -0.52
VARS-223ENST00000474643 FBXL15Q9H469 300 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
VARS-223ENST00000474643 TRAV41A0A0B4J266 112 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 IGKV1D-13A0A0B4J2D9 117 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 RRHO14718 337 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 SHOXO15266 292 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 ATP6V0E1O15342 81 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 PPYP01298 95 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 CD74P04233 296 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 IGKV1-13P0DP09 117 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 RRASP10301 218 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 ECI1P42126 302 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 TAS2R19P59542 299 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 OVCH2Q7RTZ1 564 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 NPBQ8NG41 125 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 OR11H1Q8NG94 326 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 HARBI1Q96MB7 349 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 CLCC1Q96S66 551 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 OR51J1Q9H342 316 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
VARS-223ENST00000474643 VSIG4Q9Y279 399 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 PRELID3BQ9Y3B1 194 aa11.82□□□□□ -0.52
VARS-223ENST00000474643 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 NDUFA3O95167 84 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 OR8U8P0C7N1 319 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 PSMB8P28062 276 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 DUTP33316 252 aaKnown RBP11.81□□□□□ -0.52
VARS-223ENST00000474643 RFX2P48378 723 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 TSPAN5P62079 268 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 DYRK1AQ13627 763 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 C11orf87Q6NUJ2 197 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 DHRS11Q6UWP2 260 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 KCTD9Q7L273 389 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 TMEM17Q86X19 198 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 LYSMD2Q8IV50 215 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 ARRDC1Q8N5I2 433 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 RNF152Q8N8N0 203 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 TCTEX1D2Q8WW35 142 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 TRIM63Q969Q1 353 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 C5orf30Q96GV9 206 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
VARS-223ENST00000474643 G3V318 75 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 SLC25A17O43808 307 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 FCGR3BO75015 233 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 SPDEFO95238 335 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 CRYZL1O95825 349 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 HRH1P35367 487 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 LGALS7P47929 136 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 CFHR3Q02985 330 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 ZNF616Q08AN1 781 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 MEF2DQ14814 521 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 PSG5Q15238 335 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 OR2B11Q5JQS5 317 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 GIMAP1Q8WWP7 306 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 SDHCQ99643 169 aaPredicted RBP11.8□□□□□ -0.52
VARS-223ENST00000474643 HSD17B10Q99714 261 aaKnown RBP11.8□□□□□ -0.52
VARS-223ENST00000474643 ZNF2Q9BSG1 426 aaPredicted RBP11.8□□□□□ -0.52
VARS-223ENST00000474643 CCL28Q9NRJ3 127 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 ZNF580Q9UK33 172 aa11.8□□□□□ -0.52
VARS-223ENST00000474643 A0A1W2PN81 502 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 LINC00473A8K010 186 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 TNFSF12O43508 249 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 FAUP35544 74 aaKnown RBP11.79□□□□□ -0.52
VARS-223ENST00000474643 CHRNA7P36544 502 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 GNB1P62873 340 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
VARS-223ENST00000474643 MSMO1Q15800 293 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 OR1N2Q8NGR9 330 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 OR6F1Q8NGZ6 308 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 BORCS5Q969J3 196 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 PRR25Q96S07 402 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
VARS-223ENST00000474643 C7orf50Q9BRJ6 194 aaKnown RBP11.79□□□□□ -0.52
VARS-223ENST00000474643 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 CNIH1O95406 144 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 IFNA6P05013 189 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 CATR1Q13166 79 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 VMA21Q3ZAQ7 101 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 TMEM177Q53S58 311 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 RNASE10Q5GAN6 216 aaKnown RBP11.78□□□□□ -0.52
VARS-223ENST00000474643 TRIQKQ629K1 86 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 STEAP1BQ6NZ63 245 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 ZNF66Q6ZN08 573 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 TOMM5Q8N4H5 51 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 ZBTB34Q8NCN2 500 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 GNB4Q9HAV0 340 aa11.78□□□□□ -0.52
VARS-223ENST00000474643 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
VARS-223ENST00000474643 NAP1L6A6NFF2 107 aa11.77□□□□□ -0.53
VARS-223ENST00000474643 CA2P00918 260 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms