RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 KCNIP2Q9NS61 270 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 POLR2AP24928 1970 aaKnown RBP2.85□□□□□ -1.95
UBR3-208ENST00000474426 ADAMTS13Q76LX8 1427 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 NWD2Q9ULI1 1742 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 SNRNP200O75643 2136 aaKnown RBP2.85□□□□□ -1.95
UBR3-208ENST00000474426 PIKFYVEQ9Y2I7 2098 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 TRBV24-1A0A075B6N3 115 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 TRAV26-2A0A0B4J265 109 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 BBIP1A8MTZ0 92 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 WISP2O76076 250 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 FABP6P51161 128 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 INSL3P51460 131 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 PPP1CAP62136 330 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF85Q03923 595 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 IGFBP7Q16270 282 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZC2HC1BQ5TFG8 222 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 STPG1Q5TH74 334 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ASPHD1Q5U4P2 390 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 C10orf111Q8N326 155 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 C3orf22Q8N5N4 141 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 TCEANCQ8N8B7 351 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 DCAF4L2Q8NA75 395 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF114Q8NC26 417 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 MAL2Q969L2 176 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 STARD4Q96DR4 205 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 GPR21Q99679 349 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF442Q9H7R0 627 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 BCL2L10Q9HD36 194 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 SLAMF8Q9P0V8 285 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF727A8MUV8 499 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SHISA9B4DS77 424 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 TNFSF12O43508 249 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 P01737 135 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SEC11BP0C7V7 166 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SLC25A4P12235 298 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 EDNRAP25101 427 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 CTGFP29279 349 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 FOXA3P55318 350 aaPredicted RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 TAS2R46P59540 309 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 GNB2P62879 340 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 ALG10Q5BKT4 473 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 ZNF626Q68DY1 528 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SFRP4Q6FHJ7 346 aaPredicted RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 SLC35E4Q6ICL7 350 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 ZNF441Q8N8Z8 693 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 KCTD12Q96CX2 325 aaKnown RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 BANF2Q9H503 90 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 C16orf95Q9H693 158 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 NRN1Q9NPD7 142 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 UBR2Q8IWV8 1755 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SCN8AQ9UQD0 1980 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 TNS2Q63HR2 1409 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 M0R1X1 148 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SOCS1O15524 211 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 NGFP01138 241 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 DRD3P35462 400 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 ZNF93P35789 620 aaPredicted RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 CCR2P41597 374 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 P2RX1P51575 399 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 RND2P52198 227 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 Q499Y3 187 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 CEACAM19Q7Z692 300 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 OR1L3Q8NH93 324 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 OTOSQ8NHW6 89 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 LMX1AQ8TE12 382 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 RTN4IP1Q8WWV3 396 aaPredicted RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 RNF166Q96A37 237 aaPredicted RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 ELSPBP1Q96BH3 223 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 KAZALD1Q96I82 304 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 RHNO1Q9BSD3 238 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 EMC6Q9BV81 110 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SPRY4Q9C004 299 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 IL25Q9H293 177 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 PDFQ9HBH1 243 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 NDUFB11Q9NX14 153 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 TAAR3PQ9P1P4 343 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SLC2A6Q9UGQ3 507 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 FZD1Q9UP38 647 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 HEBP2Q9Y5Z4 205 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 SELENOKQ9Y6D0 94 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 AHDC1Q5TGY3 1603 aaPredicted RBP2.84□□□□□ -1.95
UBR3-208ENST00000474426 MON2Q7Z3U7 1717 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 C1orf167Q5SNV9 1468 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 ITGB4P16144 1822 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 GLI3P10071 1580 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 TIAM1Q13009 1591 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 NRKQ7Z2Y5 1582 aa2.84□□□□□ -1.95
UBR3-208ENST00000474426 STRCP1A6NGW2 1772 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 ARFGEF2Q9Y6D5 1785 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 FXYD6-FXYD2A0A087WZ82 144 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 RIIAD1A6NNX1 92 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 WNT1P04628 370 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 TFPIP10646 304 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 PRSS3P35030 304 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 OPRK1P41145 380 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 LPAR6P43657 344 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 ZNF506Q5JVG8 444 aa2.84□□□□□ -1.96
UBR3-208ENST00000474426 FAM201AQ5SY85 155 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms