RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, human

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-204	ENST00000474413	DEFA5	Q01523	94 aa		13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	TMEM17	Q86X19	198 aa		13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	TEX45	Q8NA69	505 aa		13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	SLC5A7	Q9GZV3	580 aa		13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	ADAM30	Q9UKF2	790 aa		13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413	VSIG4	Q9Y279	399 aa		13.92	□□□□□ -0.18
EFNA1-204	ENST00000474413		A0A1B0GW64	132 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	GNRHR	P30968	328 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	HOXD3	P31249	432 aa	Predicted RBP	13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	HRH1	P35367	487 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	EGFEM1P	Q0D2K5	195 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	CBX3	Q13185	183 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	DHRS11	Q6UWP2	260 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	ZNF66	Q6ZN08	573 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	PUSL1	Q8N0Z8	303 aa	Known RBP	13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	DYNC2LI1	Q8TCX1	351 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	MOB3A	Q96BX8	217 aa		13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	MRPS7	Q9Y2R9	242 aa	Known RBP	13.91	□□□□□ -0.18
EFNA1-204	ENST00000474413	APELA	P0DMC3	54 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	HLA-DMA	P28067	261 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	VMA21	Q3ZAQ7	101 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	TMEM65	Q6PI78	240 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	LAX1	Q8IWV1	398 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	OR11H1	Q8NG94	326 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	OR5M8	Q8NGP6	311 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	OR4S2	Q8NH73	311 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	MS4A10	Q96PG2	267 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	ABHD1	Q96SE0	405 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	SCPEP1	Q9HB40	452 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	PRELID3B	Q9Y3B1	194 aa		13.9	□□□□□ -0.18
EFNA1-204	ENST00000474413	SULT1C2	O00338	296 aa		13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	LGALS1	P09382	135 aa	Known RBP	13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	TAS2R46	P59540	309 aa		13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	RNASE12	Q5GAN4	147 aa	Known RBP	13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	POC5	Q8NA72	575 aa		13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	OR5H2	Q8NGV7	314 aa		13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	SRSF12	Q8WXF0	261 aa	Known RBP	13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	AP3S1	Q92572	193 aa		13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	EXTL2	Q9UBQ6	330 aa		13.89	□□□□□ -0.19
EFNA1-204	ENST00000474413	IGHV4OR15-8	A0A075B7B6	117 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413		A0A087WW49	117 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	TEX22	C9J3V5	150 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413		E7EUB6	86 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413		H3BMQ9	156 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	CTDSP2	O14595	271 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	CNIH1	O95406	144 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	IGHV3-11	P01762	117 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	MYOD1	P15172	320 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	RPL5	P46777	297 aa	Known RBP	13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	TMBIM6	P55061	237 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	RAB25	P57735	213 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	TNXA	Q16473	311 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	PYHIN1	Q6K0P9	492 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	C19orf35	Q6ZS72	473 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	ADAD2	Q8NCV1	583 aa	Known RBP	13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	OR5T1	Q8NG75	326 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	OR52I2	Q8NH67	350 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	RAB2B	Q8WUD1	216 aa		13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	CCDC59	Q9P031	241 aa	Known RBP	13.88	□□□□□ -0.19
EFNA1-204	ENST00000474413	MSGN1	A6NI15	193 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	CGB1	A6NKQ9	187 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	FAM25A	B3EWG3	89 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	FAM25C	B3EWG5	89 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	FAM25G	B3EWG6	89 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413		K7EIL1	84 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	KBTBD11	O94819	623 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	DUS4L	O95620	317 aa	Known RBP	13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	RCVRN	P35243	200 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	TPPP2	P59282	170 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	ZNF616	Q08AN1	781 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	MZT2A	Q6P582	158 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	SPAG16	Q8N0X2	631 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	ZBTB34	Q8NCN2	500 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	OR1N2	Q8NGR9	330 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	OR51H1	Q8NH63	302 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	TMEM167A	Q8TBQ9	72 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	ISOC1	Q96CN7	298 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	RHOV	Q96L33	236 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	DCUN1D5	Q9BTE7	237 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	KLK11	Q9UBX7	282 aa		13.87	□□□□□ -0.19
EFNA1-204	ENST00000474413	SMIM31	A0A1B0GVY4	71 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413		M0QYG6	137 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	BRI3	O95415	125 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	SLURP1	P55000	103 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	HERV-K104	P61576	105 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	ZNF45	Q02386	682 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	AADACL3	Q5VUY0	350 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	BCL7B	Q9BQE9	202 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	SLIRP	Q9GZT3	109 aa	Known RBP	13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	SCOC	Q9UIL1	159 aa		13.86	□□□□□ -0.19
EFNA1-204	ENST00000474413	TRAV3	A0A0B4J244	114 aa		13.85	□□□□□ -0.19
EFNA1-204	ENST00000474413		H3BUA1	57 aa		13.85	□□□□□ -0.19
EFNA1-204	ENST00000474413	OR2A4	O95047	310 aa		13.85	□□□□□ -0.19
EFNA1-204	ENST00000474413	S1PR2	O95136	353 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms