RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 IDO2Q6ZQW0 420 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
VAMP4-203ENST00000474047 POC5Q8NA72 575 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
VAMP4-203ENST00000474047 UBE2E2Q96LR5 201 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 GPHA2Q96T91 129 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 ANAPC10Q9UM13 185 aa11.1□□□□□ -0.63
VAMP4-203ENST00000474047 CCDC160A6NGH7 325 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
VAMP4-203ENST00000474047 MPPED1O15442 326 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 DUS4LO95620 317 aaKnown RBP11.09□□□□□ -0.63
VAMP4-203ENST00000474047 HRASP01112 189 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 CRYGBP07316 175 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 LYSMD2Q8IV50 215 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 LINC00482Q8N8I6 264 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 ZNF491Q8N8L2 437 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 RAX2Q96IS3 184 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 OR5B12Q96R08 314 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
VAMP4-203ENST00000474047 TPPP2P59282 170 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 PRSS8Q16651 343 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 AADACL3Q5VUY0 350 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 ZNF818PQ6ZRF7 136 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 SPAG16Q8N0X2 631 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 VSTM2AQ8TAG5 236 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 FCAMRQ8WWV6 532 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 TMEM68Q96MH6 324 aa11.09□□□□□ -0.63
VAMP4-203ENST00000474047 CTDSP2O14595 271 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 TRGV3P03979 118 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 IFNA6P05013 189 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 S100GP29377 79 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 BEAN1Q3B7T3 259 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 VKORC1L1Q8N0U8 176 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 OR51H1Q8NH63 302 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 DPF1Q92782 380 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 MOB3AQ96BX8 217 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 MCRIP2Q9BUT9 160 aaKnown RBP11.08□□□□□ -0.64
VAMP4-203ENST00000474047 GPR61Q9BZJ8 451 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
VAMP4-203ENST00000474047 NOTCH3Q9UM47 2321 aa11.08□□□□□ -0.64
VAMP4-203ENST00000474047 MSGN1A6NI15 193 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 SOX15O60248 233 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 TPPPO94811 219 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 OR2A4O95047 310 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 GNRHRP30968 328 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 EIF4EBP1Q13541 118 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-203ENST00000474047 LPCAT3Q6P1A2 487 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 OR1N2Q8NGR9 330 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 DYNC2LI1Q8TCX1 351 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 CD300LFQ8TDQ1 290 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 ISOC1Q96CN7 298 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 RHOVQ96L33 236 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 OR2A7Q96R45 310 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 P2RX4Q99571 388 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 C6orf62Q9GZU0 229 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-203ENST00000474047 SLA2Q9H6Q3 261 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
VAMP4-203ENST00000474047 GNB4Q9HAV0 340 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 NOTCH1P46531 2555 aa11.07□□□□□ -0.64
VAMP4-203ENST00000474047 APELAP0DMC3 54 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 LAX1Q8IWV1 398 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 MYOZ3Q8TDC0 251 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 DIRAS2Q96HU8 199 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 HRASLSQ9HDD0 168 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 KLK11Q9UBX7 282 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 C13orf42A0A1B0GVH6 325 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 H3BMQ9 156 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 M0QYG6 137 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 RAMP3O60896 148 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 ZNF616Q08AN1 781 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 KIAA0141Q14154 515 aaPredicted RBP11.06□□□□□ -0.64
VAMP4-203ENST00000474047 PDLIM3Q53GG5 364 aaPredicted RBP11.06□□□□□ -0.64
VAMP4-203ENST00000474047 RNASE10Q5GAN6 216 aaKnown RBP11.06□□□□□ -0.64
VAMP4-203ENST00000474047 SRSF12Q8WXF0 261 aaKnown RBP11.06□□□□□ -0.64
VAMP4-203ENST00000474047 ABHD1Q96SE0 405 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 MIXL1Q9H2W2 232 aa11.06□□□□□ -0.64
VAMP4-203ENST00000474047 GPR31O00270 319 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 RBFOX2O43251 390 aaKnown RBP eCLIP11.05□□□□□ -0.64
VAMP4-203ENST00000474047 WIPF1O43516 503 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 KBTBD11O94819 623 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 HPRT1P00492 218 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 IGHV3-11P01762 117 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 RLN1P04808 185 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
VAMP4-203ENST00000474047 IL18Q14116 193 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms