RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 OR5B17Q8NGF7 314 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OR5M1Q8NGP8 315 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OR13C8Q8NGS7 320 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OR13D1Q8NGV5 346 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 PIGXQ8TBF5 258 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 HAVCR2Q8TDQ0 301 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 SMIM4Q8WVI0 70 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TMEM239Q8WW34 195 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TBL1YQ9BQ87 522 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TMEM243Q9BU79 118 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ADAT1Q9BUB4 502 aaKnown RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 DDA1Q9BW61 102 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 DERL2Q9GZP9 239 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ARV1Q9H2C2 271 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 PRO1933Q9H354 126 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 HRASLSQ9HDD0 168 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 UBQLN4Q9NRR5 601 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 NRBP2Q9NSY0 501 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ASF1BQ9NVP2 202 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ABRACLQ9P1F3 81 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 PCYT1BQ9Y5K3 369 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 UBIAD1Q9Y5Z9 338 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 V9GYS6 101 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF318Q5VUA4 2279 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 GBF1Q92538 1859 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MIA3Q5JRA6 1907 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 BRCA1P38398 1863 aaKnown RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 TMEM269A0A1B0GVZ9 245 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 C7orf77A4D0Y5 90 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 LINC01619G3V211 115 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 GABARAPH6UMI1 98 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 K7EP13 123 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 MANBAO00462 879 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 MAGEB4O15481 346 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 OR1I1O60431 355 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 GLSO94925 669 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 NDUFB6O95139 128 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 CD8AP01732 235 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 IGHV3-11P01762 117 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 PMP2P02689 132 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 PPBPP02775 128 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 CD5P06127 495 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 C8GP07360 202 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 TPT1P13693 172 aaKnown RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 FAUP35544 74 aaKnown RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 PSMB2P49721 201 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 UBE2E1P51965 193 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 GFERP55789 205 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 MLF1P58340 268 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SMIM11AP58511 58 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 EIF4EBP2Q13542 120 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 OR4D1Q15615 310 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 MAPK14Q16539 360 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 PSG3Q16557 428 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 GLT8D1Q68CQ7 371 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 GUSBP11Q6P575 273 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 OPN5Q6U736 354 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 Q6ZSR6 202 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SLC36A1Q7Z2H8 476 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 WDFY1Q8IWB7 410 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 HIST3H2BBQ8N257 126 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 ACBD7Q8N6N7 88 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SLC30A7Q8NEW0 376 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 OR2D3Q8NGH3 330 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 OR4C6Q8NH72 309 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 UBA3Q8TBC4 463 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SFXN5Q8TD22 340 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 RNASEH2CQ8TDP1 164 aaKnown RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 C16orf78Q8WTQ4 265 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SRSF12Q8WXF0 261 aaKnown RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 CACNG8Q8WXS5 425 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 TNFRSF14Q92956 283 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 CMBLQ96DG6 245 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SMIM8Q96KF7 97 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 UBE2E2Q96LR5 201 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 OR2M4Q96R27 311 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 NIPSNAP1Q9BPW8 284 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF426Q9BUY5 554 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF471Q9BX82 626 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SUCNR1Q9BXA5 334 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 SNHG12Q9BXW3 62 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 PORCNQ9H237 461 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 MFSD1Q9H3U5 465 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 ZNF442Q9H7R0 627 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 NMNAT1Q9HAN9 279 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-212ENST00000473961 RHOFQ9HBH0 211 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 CA10Q9NS85 328 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 DOK5Q9P104 306 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 CACFD1Q9UGQ2 172 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 GNG8Q9UK08 70 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 PCTPQ9UKL6 214 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 TNFSF18Q9UNG2 199 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 LY75O60449 1722 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 ARHGAP21Q5T5U3 1957 aa2.76□□□□□ -1.97
BRCA1-212ENST00000473961 MGAT4DA6NG13 374 aa2.75□□□□□ -1.97
BRCA1-212ENST00000473961 C9J4A7 227 aa2.75□□□□□ -1.97
BRCA1-212ENST00000473961 TMEM238C9JI98 176 aa2.75□□□□□ -1.97
BRCA1-212ENST00000473961 E7EQ34 232 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms