RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ZNHIT6Q9NWK9 470 aaKnown RBP1.37□□□□□ -2.19
CLK1-209ENST00000472679 NAV1Q8NEY1 1877 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 FABP12A6NFH5 140 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 CIAO1O76071 339 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 PSMB6P28072 239 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 CD79BP40259 229 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 FXYD7P58549 80 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 TAS2R20P59543 309 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 FKBP1AP62942 108 aaKnown RBP1.36□□□□□ -2.19
CLK1-209ENST00000472679 ZNF705AQ6ZN79 300 aaPredicted RBP1.36□□□□□ -2.19
CLK1-209ENST00000472679 RASSF6Q6ZTQ3 369 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 OR7G1Q8NGA0 311 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 DOHHQ9BU89 302 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 EURLQ9NYK6 297 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 CD300AQ9UGN4 299 aa1.36□□□□□ -2.19
CLK1-209ENST00000472679 IGHV1-18A0A0C4DH31 117 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 H3BT86 120 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 HPGDSO60760 199 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 LGALS1P09382 135 aaKnown RBP1.35□□□□□ -2.19
CLK1-209ENST00000472679 TPI1P60174 286 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 PLPPR5Q32ZL2 321 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 CLEC6AQ6EIG7 209 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 NAA40Q86UY6 237 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 EEF1AKMT1Q8WVE0 214 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 ANKRD36BP1Q96IX9 119 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 PACRGQ96M98 296 aaPredicted RBP1.35□□□□□ -2.19
CLK1-209ENST00000472679 RAD50Q92878 1312 aa1.35□□□□□ -2.19
CLK1-209ENST00000472679 A0A0J9YW62 118 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 HMSDA8MTL9 139 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 BIRC5O15392 142 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 NEMFO60524 1076 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 HIST1H1CP16403 213 aaKnown RBP1.34□□□□□ -2.19
CLK1-209ENST00000472679 UGT2B7P16662 529 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 RPL28P46779 137 aaKnown RBP1.34□□□□□ -2.19
CLK1-209ENST00000472679 CXCR4P61073 352 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 FP248Q71RG6 208 aaPredicted RBP1.34□□□□□ -2.19
CLK1-209ENST00000472679 SLC36A1Q7Z2H8 476 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 DNAJB3Q8WWF6 145 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 SLC7A6Q92536 515 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 CCL13Q99616 98 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 DCUN1D5Q9BTE7 237 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 HRASLSQ9HDD0 168 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 TIMM9Q9Y5J7 89 aa1.34□□□□□ -2.19
CLK1-209ENST00000472679 PTPRSQ13332 1948 aa1.34□□□□□ -2.2
CLK1-209ENST00000472679 TRAV7A0A075B6U4 112 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 COX7A2LO14548 114 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 CRPP02741 224 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 SERPINA7P05543 415 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 AKR1C3P42330 323 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 MOGQ16653 247 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 SMIM19Q96E16 107 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 TMA16Q96EY4 203 aaKnown RBP1.33□□□□□ -2.2
CLK1-209ENST00000472679 ZNF514Q96K75 400 aaPredicted RBP1.33□□□□□ -2.2
CLK1-209ENST00000472679 C7orf50Q9BRJ6 194 aaKnown RBP1.33□□□□□ -2.2
CLK1-209ENST00000472679 CST9LQ9H4G1 147 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 HES4Q9HCC6 221 aa1.33□□□□□ -2.2
CLK1-209ENST00000472679 PCDH15Q96QU1 1955 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 BRWD1Q9NSI6 2320 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 A0A0D9SEW6 157 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 TMEM269A0A1B0GVZ9 245 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 H7C2G1 150 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 APOMO95445 188 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 TFPTP0C1Z6 253 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 CCL5P13501 91 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 PSMB8P28062 276 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 UBE2G2P60604 165 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 LRRC75BQ2VPJ9 315 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 UNQ6190/PRO20217Q6UXQ8 127 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 C7orf65Q6ZTY9 151 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 OR2T27Q8NH04 317 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 GNPNAT1Q96EK6 184 aaPredicted RBP1.32□□□□□ -2.2
CLK1-209ENST00000472679 DHRS9Q9BPW9 319 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 UPF3BQ9BZI7 483 aaKnown RBP1.32□□□□□ -2.2
CLK1-209ENST00000472679 CFAP45Q9UL16 551 aa1.32□□□□□ -2.2
CLK1-209ENST00000472679 TRAV38-1A0A0B4J264 116 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 F5H768 121 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 CALUO43852 315 aaPredicted RBP1.31□□□□□ -2.2
CLK1-209ENST00000472679 G6PCP35575 357 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 SLCO1A2P46721 670 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 EMP1P54849 157 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 RAB14P61106 215 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 AP1S1P61966 158 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 SBSNQ6UWP8 590 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 UBL4BQ8N7F7 174 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 ATP6V1G3Q96LB4 118 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 COQ4Q9Y3A0 265 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 SOX21Q9Y651 276 aaPredicted RBP1.31□□□□□ -2.2
CLK1-209ENST00000472679 FLT4P35916 1363 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 NUP160Q12769 1436 aa1.31□□□□□ -2.2
CLK1-209ENST00000472679 MEIKINA0A087WXM9 373 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 IGKV3D-7A0A0C4DH55 119 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 IGKV3OR2-268A0A0C4DH90 116 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 COCHO43405 550 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 CREBL2O60519 120 aaPredicted RBP1.3□□□□□ -2.2
CLK1-209ENST00000472679 PPBPP02775 128 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 REG1AP05451 166 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 ALDH3A1P30838 453 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 ACSM3Q53FZ2 586 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 UMODL1-AS1Q8N2C9 162 aa1.3□□□□□ -2.2
CLK1-209ENST00000472679 SGMS2Q8NHU3 365 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms