RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 COQ8AQ8NI60 647 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 CASTOR1Q8WTX7 329 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 TMEM230Q96A57 120 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 R3HDM4Q96D70 268 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 RRNAD1Q96FB5 475 aaKnown RBP13.49□□□□□ -0.25
CCM2-205ENST00000472223 TMEM222Q9H0R3 208 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 BEX1Q9HBH7 125 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 UCP1P25874 307 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 AKR1C2P52895 323 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 ARSJQ5FYB0 599 aaPredicted RBP13.48□□□□□ -0.25
CCM2-205ENST00000472223 LYG2Q86SG7 212 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 NPBQ8NG41 125 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 PHB2Q99623 299 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 MARVELD1Q9BSK0 173 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 CHIAQ9BZP6 476 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 NPFFR1Q9GZQ6 430 aa13.48□□□□□ -0.25
CCM2-205ENST00000472223 METTL1Q9UBP6 276 aaKnown RBP13.48□□□□□ -0.25
CCM2-205ENST00000472223 ANK3Q12955 4377 aaKnown RBP13.48□□□□□ -0.25
CCM2-205ENST00000472223 C9orf170A2RU37 121 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 RRHO14718 337 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 FGF16O43320 207 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 SLC25A17O43808 307 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 ACTL6BO94805 426 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 S1PR2O95136 353 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 KRASP01116 189 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 RNASE1P07998 156 aaKnown RBP13.47□□□□□ -0.25
CCM2-205ENST00000472223 MECP2P51608 486 aaKnown RBP13.47□□□□□ -0.25
CCM2-205ENST00000472223 UBE2KP61086 200 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 RPL15P61313 204 aaKnown RBP13.47□□□□□ -0.25
CCM2-205ENST00000472223 H2BFWTQ7Z2G1 175 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 Q8N6K4 173 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 TEX45Q8NA69 505 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 GLYATL2Q8WU03 294 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 RBPMSQ93062 196 aaKnown RBP13.47□□□□□ -0.25
CCM2-205ENST00000472223 IL22RA2Q969J5 263 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 RHOVQ96L33 236 aa13.47□□□□□ -0.25
CCM2-205ENST00000472223 MARCH11A6NNE9 402 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 GPR137BO60478 399 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 SNAPC5O75971 98 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 OR2A4O95047 310 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 DUS4LO95620 317 aaKnown RBP13.46□□□□□ -0.25
CCM2-205ENST00000472223 CDS2O95674 445 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 IL5P05113 134 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 F2RL1P55085 397 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 BRWD1-AS2P59051 145 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 UBA52P62987 128 aaKnown RBP13.46□□□□□ -0.25
CCM2-205ENST00000472223 DHRS2Q13268 280 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 TMEM187Q14656 261 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 PSG5Q15238 335 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 ZNF585BQ52M93 769 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 TMEM268Q5VZI3 342 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 LIN54Q6MZP7 749 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 SSX9Q7RTT3 188 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 OR4A5Q8NH83 315 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 OR2A7Q96R45 310 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 PRSS22Q9GZN4 317 aa13.46□□□□□ -0.25
CCM2-205ENST00000472223 FN1P02751 2386 aaKnown RBP13.46□□□□□ -0.25
CCM2-205ENST00000472223 NDUFA3O95167 84 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 IFNA21P01568 189 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 G6PCP35575 357 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 SUPT4H1P63272 117 aaKnown RBP13.45□□□□□ -0.26
CCM2-205ENST00000472223 C5orf64Q2M2E5 130 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 C9orf152Q5JTZ5 239 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 UXS1Q8NBZ7 420 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 ZNF431Q8TF32 576 aaPredicted RBP13.45□□□□□ -0.26
CCM2-205ENST00000472223 RITA1Q96K30 269 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 TMEM56Q96MV1 263 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 FBXL15Q9H469 300 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 ESM1Q9NQ30 184 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 TMEM56-RWDD3S4R434 201 aa13.45□□□□□ -0.26
CCM2-205ENST00000472223 TEP1Q99973 2627 aaKnown RBP13.44□□□□□ -0.26
CCM2-205ENST00000472223 DUXBA0A1W2PPF3 345 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 RBMXL2O75526 392 aaKnown RBP13.44□□□□□ -0.26
CCM2-205ENST00000472223 CNIH1O95406 144 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 SAA1P0DJI8 122 aaPredicted RBP13.44□□□□□ -0.26
CCM2-205ENST00000472223 VSIG10L2P0DP72 767 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 CNTFRP26992 372 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 PPP1R27Q86WC6 154 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 SELENOHQ8IZQ5 122 aaKnown RBP13.44□□□□□ -0.26
CCM2-205ENST00000472223 VKORC1L1Q8N0U8 176 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 C5orf56Q8N8D9 126 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 OR4A16Q8NH70 328 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 CLCC1Q96S66 551 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 RANBP3Q9H6Z4 567 aaPredicted RBP13.44□□□□□ -0.26
CCM2-205ENST00000472223 PLSCR3Q9NRY6 295 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 SIGLEC9Q9Y336 463 aa13.44□□□□□ -0.26
CCM2-205ENST00000472223 A0A0B4J2A0 478 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 SRRM4A7MD48 611 aaKnown RBP13.43□□□□□ -0.26
CCM2-205ENST00000472223 SNRPGP15A8MWD9 76 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 SPNP16150 400 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 VDAC1P21796 283 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 OXA1LQ15070 435 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 POU2AF1Q16633 256 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 OR4A47Q6IF82 309 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 MMD2Q8IY49 270 aa13.43□□□□□ -0.26
CCM2-205ENST00000472223 C12orf45Q8N5I9 185 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms