RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 CCDC115Q96NT0 180 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 GPR82Q96P67 336 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 TRNT1Q96Q11 434 aaKnown RBP2.27□□□□□ -2.05
HDAC9-221ENST00000471887 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 MARVELD1Q9BSK0 173 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 RAB1BQ9H0U4 201 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 SLC38A1Q9H2H9 487 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 OR51I1Q9H343 314 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 SVEP1Q4LDE5 3571 aa2.27□□□□□ -2.05
HDAC9-221ENST00000471887 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
HDAC9-221ENST00000471887 IGLV3-9A0A075B6K5 115 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 IGHV2OR16-5A0A0B4J2B6 119 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 CLDN24A6NM45 220 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF99A8MXY4 864 aaPredicted RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 hCG_2039718K7EN88 272 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 M0R233 179 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 HBE1P02100 147 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 SHBGP04278 402 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 DBIP07108 87 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 BPGMP07738 259 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ERCC1P07992 297 aaPredicted RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 MSMBP08118 114 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 TFPTP0C1Z6 253 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 OR12D1P0DN82 309 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF35P13682 527 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 LGALS3P17931 250 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 GTF2E2P29084 291 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ARR3P36575 388 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 SRP14P37108 136 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 GALR1P47211 349 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 OR2B6P58173 313 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 GNA13Q14344 377 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 LIN52Q52LA3 116 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 HIKESHIQ53FT3 197 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 MRPL2Q5T653 305 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 C1orf140Q5VVS0 124 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 TNFAIP8L2Q6P589 184 aaPredicted RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 OLIG3Q7RTU3 272 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 C4orf33Q8N1A6 199 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 TRIML2Q8N7C3 387 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 OR4A15Q8NGL6 344 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 OR1L1Q8NH94 360 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 CLDND2Q8NHS1 167 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 MFSD8Q8NHS3 518 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF563Q8TA94 476 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF418Q8TF45 676 aaPredicted RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ZCCHC13Q8WW36 166 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ANP32BQ92688 251 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 KCNS3Q9BQ31 491 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 TAPBPLQ9BX59 468 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 ACTR3CQ9C0K3 210 aaPredicted RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 BCL2L10Q9HD36 194 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 CALML5Q9NZT1 146 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 FBXL3Q9UKT7 428 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 FIS1Q9Y3D6 152 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 GMEB1Q9Y692 573 aa2.26□□□□□ -2.05
HDAC9-221ENST00000471887 HEATR1Q9H583 2144 aaKnown RBP2.26□□□□□ -2.05
HDAC9-221ENST00000471887 WNK2Q9Y3S1 2297 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 IGKV1D-42A0A075B6H8 117 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 J3QLI3 93 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 M0R3G1 203 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 BIRC5O15392 142 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 OR2T1O43869 369 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 AHSA1O95433 338 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 SNAP29O95721 258 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 SERPINE1P05121 402 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 RAB4AP20338 218 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 MYL9P24844 172 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 CXCR1P25024 350 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 PFN2P35080 140 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 GLRXP35754 106 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 RAB7AP51149 207 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 TMEM33P57088 247 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 IFITM3Q01628 133 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF829Q3KNS6 432 aaPredicted RBP2.25□□□□□ -2.05
HDAC9-221ENST00000471887 TNFAIP8L3Q5GJ75 292 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 STUMQ69YW2 141 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 DHRS4L2Q6PKH6 230 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 ZCCHC23Q6ZST2 131 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 DPPA2Q7Z7J5 298 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 SGPP2Q8IWX5 399 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 CDH26Q8IXH8 852 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 C20orf196Q8IYI0 205 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 BPIFCQ8NFQ6 507 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 OR2Z1Q8NG97 314 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 OR51F2Q8NH61 342 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 TCP10LQ8TDR4 215 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 RXFP4Q8TDU9 374 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 RAB8BQ92930 207 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 SEC22CQ9BRL7 303 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 TMEM109Q9BVC6 243 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 SUCNR1Q9BXA5 334 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 C1QTNF6Q9BXI9 259 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 DPY30Q9C005 99 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 METTL17Q9H7H0 456 aaPredicted RBP2.25□□□□□ -2.05
HDAC9-221ENST00000471887 DYNLRB1Q9NP97 96 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF443Q9Y2A4 671 aaPredicted RBP2.25□□□□□ -2.05
HDAC9-221ENST00000471887 LRRC42Q9Y546 428 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 WNK1Q9H4A3 2382 aa2.25□□□□□ -2.05
HDAC9-221ENST00000471887 DYSFO75923 2080 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms