RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TRPM3Q9HCF6 1732 aaPredicted RBP3.56□□□□□ -1.84
SMC5-202ENST00000471372 NID2Q14112 1375 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 MTUS2Q5JR59 1369 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 ZBED9Q6R2W3 1325 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 IGHV3-73A0A0B4J1V6 119 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 PSG4Q00888 419 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 CDK10Q15131 360 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 LPCAT3Q6P1A2 487 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 ZNF322Q6U7Q0 402 aaPredicted RBP3.56□□□□□ -1.84
SMC5-202ENST00000471372 SLC35F6Q8N357 371 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 OR10D4PQ8NGN7 298 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 ULBP3Q9BZM4 244 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 KLK5Q9Y337 293 aaPredicted RBP3.56□□□□□ -1.84
SMC5-202ENST00000471372 MMACHCQ9Y4U1 282 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 HEY1Q9Y5J3 304 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 NLRC5Q86WI3 1866 aa3.56□□□□□ -1.84
SMC5-202ENST00000471372 PCF11O94913 1555 aaKnown RBP3.55□□□□□ -1.84
SMC5-202ENST00000471372 PRR14LQ5THK1 2151 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 A0A087WUU8 490 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 A0A1W2PNU3 283 aaPredicted RBP3.55□□□□□ -1.84
SMC5-202ENST00000471372 VPS37CA5D8V6 355 aaPredicted RBP3.55□□□□□ -1.84
SMC5-202ENST00000471372 KNCNA6PVL3 124 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 PLA2G10O15496 165 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 SULT1B1O43704 296 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 TTRP02766 147 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 LPAR6P43657 344 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 RPL5P46777 297 aaKnown RBP3.55□□□□□ -1.84
SMC5-202ENST00000471372 DEFA1P59665 94 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 BAMBIQ13145 260 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 OR10X1Q8NGY0 326 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 SIGMAR1Q99720 223 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 MND1Q9BWT6 205 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 DOK5Q9P104 306 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 AK3Q9UIJ7 227 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 CACNA1DQ01668 2161 aa3.55□□□□□ -1.84
SMC5-202ENST00000471372 MDFIC2A0A1B0GVS7 189 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 OR4C46A6NHA9 309 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 FKBP1AP62942 108 aaKnown RBP3.54□□□□□ -1.84
SMC5-202ENST00000471372 KCNJ8Q15842 424 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 GUK1Q16774 197 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 HACD4Q5VWC8 232 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 IGFL3Q6UXB1 125 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 C20orf196Q8IYI0 205 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 CNEP1R1Q8N9A8 125 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 CEP19Q96LK0 163 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 ERMAPQ96PL5 475 aaPredicted RBP3.54□□□□□ -1.84
SMC5-202ENST00000471372 HIGD2AQ9BW72 106 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 TRIM4Q9C037 500 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 IDI2-AS1Q9NZ38 188 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 PRELID1Q9Y255 219 aa3.54□□□□□ -1.84
SMC5-202ENST00000471372 DSCAMO60469 2012 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 A0A1W2PNN7 141 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 C17orf51A8MQB3 221 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 FAAHO00519 579 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 TP53I11O14683 189 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 PSCAO43653 123 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 NOS1APO75052 506 aaPredicted RBP3.53□□□□□ -1.84
SMC5-202ENST00000471372 IGHV1-69P01742 117 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 CST2P09228 141 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 GABRA2P47869 451 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 RPS20P60866 119 aaKnown RBP3.53□□□□□ -1.84
SMC5-202ENST00000471372 SNRPD2P62316 118 aaKnown RBP3.53□□□□□ -1.84
SMC5-202ENST00000471372 CAV1Q03135 178 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 ZNF117Q03924 483 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 GLT6D1Q7Z4J2 308 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 CAPZA3Q96KX2 299 aa3.53□□□□□ -1.84
SMC5-202ENST00000471372 ABCC12Q96J65 1359 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 CACNA1SQ13698 1873 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 OR5K4A6NMS3 321 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 ZNF878C9JN71 531 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 KCNE1P15382 129 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 C2orf91Q6ZV80 131 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 ANKRD29Q8N6D5 301 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 ZNF676Q8N7Q3 588 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 PXT1Q8NFP0 134 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 OR4X1Q8NH49 305 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 GPR119Q8TDV5 335 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 TTTY13Q9BZ97 58 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 MCTS1Q9ULC4 181 aaKnown RBP3.52□□□□□ -1.85
SMC5-202ENST00000471372 SHANK3Q9BYB0 1731 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 LTBP4Q8N2S1 1624 aa3.52□□□□□ -1.85
SMC5-202ENST00000471372 SHANK1Q9Y566 2161 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 NDUFB2O95178 105 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 IGLV3-19P01714 112 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 HLA-DRB1P01911 266 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 G0S2P27469 103 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 CD200P41217 278 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 RPL27AP46776 148 aaKnown RBP3.51□□□□□ -1.85
SMC5-202ENST00000471372 SERPINB9P50453 376 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 TAS2R30P59541 319 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 RPL30P62888 115 aaKnown RBP3.51□□□□□ -1.85
SMC5-202ENST00000471372 HIST1H3AP68431 136 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 H3F3AP84243 136 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 GNA12Q03113 381 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 LIN52Q52LA3 116 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 TMEM42Q69YG0 159 aa3.51□□□□□ -1.85
SMC5-202ENST00000471372 OR8B12Q8NGG6 310 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms