RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 CSTAP01040 98 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 ACSM4P0C7M7 580 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 TROVE2P10155 538 aaKnown RBP eCLIP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 KITLGP21583 273 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 SPRR2DP22532 72 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 EVI2BP34910 448 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 HADHBP55084 474 aaKnown RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 RGS8P57771 180 aaPredicted RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 OR12D2P58182 307 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 STXBP1P61764 594 aaKnown RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 SLC25A11Q02978 314 aaKnown RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 SPANXN2Q5MJ10 180 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 FAM201AQ5SY85 155 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 DUPD1Q68J44 220 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 C8orf74Q6P047 294 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 TBPL2Q6SJ96 375 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 CLEC19AQ6UXS0 136 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 Q6ZRN7 208 aaPredicted RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 EIF3MQ7L2H7 374 aaKnown RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 CENPQQ7L2Z9 268 aaPredicted RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 TCF23Q7RTU1 214 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 TCAIMQ8N3R3 496 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 C19orf18Q8NEA5 215 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 OR10AD1Q8NGE0 317 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 OR1S2Q8NGQ3 325 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 ZNF502Q8TBZ5 544 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 NT5CQ8TCD5 201 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 MCUR1Q96AQ8 359 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 ZHX1-C8orf76Q96EF9 292 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 GPR82Q96P67 336 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 CENPKQ9BS16 269 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 MARVELD1Q9BSK0 173 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 EBPLQ9BY08 206 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 ROPN1BQ9BZX4 212 aaPredicted RBP1.22□□□□□ -2.21
ITGA6-209ENST00000470259 PTTG3PQ9NZH4 202 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 AP3M1Q9Y2T2 418 aa1.22□□□□□ -2.21
ITGA6-209ENST00000470259 LOC100506127A0A0U1RQW1 187 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 SMCO3A2RU48 225 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 IQCF5A8MTL0 148 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 GOLGA8TH3BQL2 631 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 TEX46H3BTG2 121 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 I3L521 148 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CETN3O15182 167 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 NUPL2O15504 423 aaKnown RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 E2F6O75461 281 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 RAB36O95755 333 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 MBP02144 154 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 KRT14P02533 472 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 SERPINE1P05121 402 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CGB3P0DN86 165 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 ERGP11308 486 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CPMP14384 443 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CPN2P22792 545 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CD24P25063 80 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CCR7P32248 378 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 BCAP31P51572 246 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CCL18P55774 89 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 ERVS71-1P61550 626 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 LIPEQ05469 1076 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 MERTKQ12866 999 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 PMS2P3Q13401 168 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 GK3PQ14409 553 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 UAP1Q16222 522 aaPredicted RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 Q3ZCU0 254 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 XKR7Q5GH72 579 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 FAM45BPQ6NSW5 357 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 RNASEKQ6P5S7 137 aaKnown RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 Q6ZSA8 131 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 SLC35E3Q7Z769 313 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 MARCH3Q86UD3 253 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 MICU2Q8IYU8 434 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 ST13P4Q8IZP2 240 aaPredicted RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 OFCC1Q8IZS5 231 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 C1orf158Q8N1D5 194 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 TRIML2Q8N7C3 387 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 OR4K2Q8NGD2 314 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 KCNG3Q8TAE7 436 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 ZNF420Q8TAQ5 688 aaPredicted RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 PIGXQ8TBF5 258 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 SUN5Q8TC36 379 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 FAM45AQ8TCE6 357 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 GPR151Q8TDV0 419 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 H1FXQ92522 213 aaKnown RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 ANKRD7Q92527 254 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 TNFRSF14Q92956 283 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 TRIB3Q96RU7 358 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 MICU1Q9BPX6 476 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 ANKRA2Q9H9E1 313 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 LZTFL1Q9NQ48 299 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 MRPL22Q9NWU5 206 aaKnown RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 CFL2Q9Y281 166 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 HILPDAQ9Y5L2 63 aa1.21□□□□□ -2.22
ITGA6-209ENST00000470259 V9GYY5 206 aaPredicted RBP1.21□□□□□ -2.22
ITGA6-209ENST00000470259 TRAV3A0A0B4J244 114 aa1.2□□□□□ -2.22
ITGA6-209ENST00000470259 TTC4O95801 387 aa1.2□□□□□ -2.22
ITGA6-209ENST00000470259 HLA-HP01893 362 aa1.2□□□□□ -2.22
ITGA6-209ENST00000470259 CLPSP04118 112 aa1.2□□□□□ -2.22
ITGA6-209ENST00000470259 IGKV1-16P04430 117 aa1.2□□□□□ -2.22
ITGA6-209ENST00000470259 HLA-DQB2P05538 268 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms