RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 A0A096LNT2 108 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SAA2-SAA4A0A096LPE2 208 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV3-72A0A0B4J1Y9 119 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 GAGE12JA6NER3 117 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 A8MV72 311 aaPredicted RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 A8MXK9 166 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 FAM25EA8MYX2 175 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RNASEK-C17orf49H0YIS7 233 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RAB29O14966 203 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SSNA1O43805 119 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 NDUFB8O95169 186 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SFT2D2O95562 160 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SAA2P0DJI9 122 aaPredicted RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 IL3RAP26951 378 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 CD34P28906 385 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 LPAR6P43657 344 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RAB7AP51149 207 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RPL30P62888 115 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 PAX2Q02962 417 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 PAX8Q06710 450 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF816Q0VGE8 651 aaPredicted RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 PPP1R1AQ13522 171 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 DIAPH2-AS1Q14236 149 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 TWIST1Q15672 202 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RUSC1-AS1Q66K80 236 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 C11orf88Q6PI97 169 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC25A48Q6ZT89 311 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 LHFPL4Q7Z7J7 247 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 MOB3BQ86TA1 216 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC25A42Q86VD7 318 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SGPP2Q8IWX5 399 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 DRAM1Q8N682 238 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF645Q8N7E2 425 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 NRACQ8N912 160 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 CCDC71LQ8N9Z2 235 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF439Q8NDP4 499 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 TCTEX1D2Q8WW35 142 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RTN4IP1Q8WWV3 396 aaPredicted RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 DEDD2Q8WXF8 326 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM230Q96A57 120 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 RPEQ96AT9 228 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 AKR1E2Q96JD6 320 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 S1PR3Q99500 378 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 MARVELD1Q9BSK0 173 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SIRPDQ9H106 197 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 OR51J1Q9H342 316 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 NAA60Q9H7X0 242 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 METTL8Q9H825 291 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 LINC00574Q9H8X3 128 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 GPN1Q9HCN4 374 aaPredicted RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SDHAF2Q9NX18 166 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC2A8Q9NY64 477 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 PIPOXQ9P0Z9 390 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 TNFRSF18Q9Y5U5 241 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SOX21Q9Y651 276 aaPredicted RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 ALG5Q9Y673 324 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 MALRD1Q5VYJ5 2156 aa3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 FASNP49327 2511 aaKnown RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TRAV40A0A0B4J280 105 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 IGLV5-39A0A0G2JS06 123 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CENPVL3A0A0U1RRI6 287 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C3orf85A0A1B0GTC6 90 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C13orf42A0A1B0GVH6 325 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 C9orf170A2RU37 121 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CRYM-AS1A6NIL9 109 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 LEUTXA8MZ59 168 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 BUB1B-PAK6H3BSN5 160 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 H7C2Y5 167 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CCSO14618 274 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 GOSR2O14653 212 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CREBL2O60519 120 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 FCGR3BO75015 233 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC22A5O76082 557 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SIX6O95475 246 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 IFNA2P01563 188 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 HLA-AP01891 365 aaKnown RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 RBP4P02753 201 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 GAPDHP04406 335 aaKnown RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 IL5P05113 134 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SERPINE2P07093 398 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 HOXB5P09067 269 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 OR5AC1P0C628 307 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CT45A6P0DMU7 189 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CT45A5P0DMU8 189 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CT45A7P0DMV0 189 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV4-38-2P0DP08 117 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 ANXA3P12429 323 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 MMP9P14780 707 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CD24P25063 80 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 HTR1DP28221 377 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SRP14P37108 136 aaKnown RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 RAB13P51153 203 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 UBE2E1P51965 193 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 TAS2R31P59538 309 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 DHODHQ02127 395 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 CATR1Q13166 79 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 HNF4GQ14541 408 aa3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SURF2Q15527 256 aaPredicted RBP3.28□□□□□ -1.88
TMEM39A-204ENST00000468545 SSX2Q16385 188 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms