RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CACNG8Q8WXS5 425 aa9.8□□□□□ -0.84
PTPN7-207ENST00000468385 MND1Q9BWT6 205 aa9.8□□□□□ -0.84
PTPN7-207ENST00000468385 ZNF430Q9H8G1 570 aaPredicted RBP9.8□□□□□ -0.84
PTPN7-207ENST00000468385 PLGRKTQ9HBL7 147 aa9.8□□□□□ -0.84
PTPN7-207ENST00000468385 KCNK7Q9Y2U2 307 aa9.8□□□□□ -0.84
PTPN7-207ENST00000468385 LSM2Q9Y333 95 aaKnown RBP9.8□□□□□ -0.84
PTPN7-207ENST00000468385 AK6Q9Y3D8 172 aaKnown RBP9.8□□□□□ -0.84
PTPN7-207ENST00000468385 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
PTPN7-207ENST00000468385 VPS13DQ5THJ4 4388 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 LINC00473A8K010 186 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 LGALS9O00182 355 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 DENRO43583 198 aaKnown RBP9.79□□□□□ -0.84
PTPN7-207ENST00000468385 OR2C1O95371 312 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 CDK1P06493 297 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 FCGR3AP08637 254 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 CLDN12P56749 244 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 PLA2G7Q13093 441 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 RAB11BQ15907 218 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 C10orf55Q5SWW7 151 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 PACRGLQ8N7B6 248 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 OR56B1Q8NGI3 324 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 OSR1Q8TAX0 266 aaPredicted RBP9.79□□□□□ -0.84
PTPN7-207ENST00000468385 SPIN2AQ99865 258 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 SPIN2BQ9BPZ2 258 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 ST6GALNAC5Q9BVH7 336 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 GGTLC1Q9BX51 225 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 C8orf4Q9NR00 106 aa9.79□□□□□ -0.84
PTPN7-207ENST00000468385 GGCTO75223 188 aaKnown RBP9.78□□□□□ -0.84
PTPN7-207ENST00000468385 DIRAS3O95661 229 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 SAA1P0DJI8 122 aaPredicted RBP9.78□□□□□ -0.84
PTPN7-207ENST00000468385 CBLN1P23435 193 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 EWSR1Q01844 656 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPN7-207ENST00000468385 TPBGQ13641 420 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 PMS2P11Q13670 270 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 CDK10Q15131 360 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 SPHARQ15513 63 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 C2orf76Q3KRA6 126 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 FAM209BQ5JX69 171 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 TMEM91Q6ZNR0 172 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 C19orf35Q6ZS72 473 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 SLC16A13Q7RTY0 426 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 TMEM61Q8N0U2 210 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 MAFIPQ8WZ33 124 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 TMEM203Q969S6 136 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 ADTRPQ96IZ2 230 aa9.78□□□□□ -0.84
PTPN7-207ENST00000468385 RBM7Q9Y580 266 aaKnown RBP9.78□□□□□ -0.84
PTPN7-207ENST00000468385 LOC102724200A0A096LPH7 203 aaPredicted RBP9.77□□□□□ -0.85
PTPN7-207ENST00000468385 TMEM213A2RRL7 107 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 CXorf65A6NEN9 183 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 HMX3A6NHT5 357 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 TEX22C9J3V5 150 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 MRPS15P82914 257 aaKnown RBP9.77□□□□□ -0.85
PTPN7-207ENST00000468385 MED22Q15528 200 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 LIPKQ5VXJ0 399 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 ZNF57Q68EA5 555 aaPredicted RBP9.77□□□□□ -0.85
PTPN7-207ENST00000468385 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 FAM3DQ96BQ1 224 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 MLXQ9UH92 298 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 ZNF257Q9Y2Q1 563 aa9.77□□□□□ -0.85
PTPN7-207ENST00000468385 A0A0J9YWU9 116 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 TMEM272A0A1B0GTI8 110 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 E7EUB6 86 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 CREBL2O60519 120 aaPredicted RBP9.76□□□□□ -0.85
PTPN7-207ENST00000468385 ACTL6BO94805 426 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 IGHV3-23P01764 117 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 SLC25A42Q86VD7 318 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 H1FOOQ8IZA3 346 aaPredicted RBP9.76□□□□□ -0.85
PTPN7-207ENST00000468385 OR52B4Q8NGK2 314 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 UFD1Q92890 307 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 RAB3CQ96E17 227 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 CCDC140Q96MF4 163 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 FANCD2OSQ96PS1 177 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 GINS4Q9BRT9 223 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 DNAH6Q9C0G6 4158 aa9.76□□□□□ -0.85
PTPN7-207ENST00000468385 IGKV1D-8A0A087WSZ0 117 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 NPIPB5A8MRT5 1133 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 A8MWP6 167 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 MFNGO00587 321 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 FCGR3BO75015 233 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 SCAF4O95104 1147 aaKnown RBP9.75□□□□□ -0.85
PTPN7-207ENST00000468385 NDUFB8O95169 186 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 IL6RP08887 468 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-207ENST00000468385 GNB3P16520 340 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 ARL3P36405 182 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 RPS25P62851 125 aaKnown RBP9.75□□□□□ -0.85
PTPN7-207ENST00000468385 TNFRSF9Q07011 255 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 IRF3Q14653 427 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 TM4SF20Q53R12 229 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 CEMP1Q6PRD7 247 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-207ENST00000468385 CLEC19AQ6UXS0 136 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 UXS1Q8NBZ7 420 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 CNBD2Q96M20 576 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 RAB22AQ9UL26 194 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 S4R3C0 116 aa9.75□□□□□ -0.85
PTPN7-207ENST00000468385 A0A1B0GW64 132 aa9.74□□□□□ -0.85
PTPN7-207ENST00000468385 PTGES3LE9PB15 166 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms