RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 NRN1Q9NPD7 142 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 TBL2Q9Y4P3 447 aaKnown RBP15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 TIMM9Q9Y5J7 89 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 ARF6P62330 175 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 OR5P3Q8WZ94 311 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 GMPPAQ96IJ6 420 aaPredicted RBP15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 C1QTNF5Q9BXJ0 243 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 SPRY4Q9C004 299 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 ZNF430Q9H8G1 570 aaPredicted RBP15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 RNF114Q9Y508 228 aa15.2■□□□□ 0.02
SNAPC3-205ENST00000467062 PIGBOS1A0A0B4J2F0 54 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 MDFIC2A0A1B0GVS7 189 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 SH2D1BO14796 132 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 PDCD6O75340 191 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 TOX4O94842 621 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 RNPS1Q15287 305 aaKnown RBP15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 DHRS13Q6UX07 377 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 LHFPL4Q7Z7J7 247 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 OR5D13Q8NGL4 314 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 KITLGP21583 273 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 CBLN1P23435 193 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 PLGLB1Q02325 96 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 TMEM251Q8N6I4 163 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 TAF15Q92804 592 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 SFRP2Q96HF1 295 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 FAM173AQ9BQD7 235 aa15.19■□□□□ 0.02
SNAPC3-205ENST00000467062 DPRXA6NFQ7 191 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 PAGE4O60829 102 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 SLC25A6P12236 298 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 APOBEC3AP31941 199 aaPredicted RBP15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 ZNF295-AS1Q8N0V1 137 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 ZNF596Q8TC21 504 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 C1QTNF9BB2RNN3 333 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 SCTP09683 121 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 PSG1P11464 419 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 LRRC10Q5BKY1 277 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 SPATA46Q5T0L3 261 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 GATAD1Q8WUU5 269 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 SLC25A22Q9H936 323 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 CHODLQ9H9P2 273 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 PSENENQ9NZ42 101 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 SH3BGRL2Q9UJC5 107 aa15.18■□□□□ 0.02
SNAPC3-205ENST00000467062 HMGB3O15347 200 aaKnown RBP15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 SYNGR1O43759 233 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 IGKV1D-33P01593 117 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 IGKV1-33P01594 117 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 AMTP48728 403 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 PRRX1P54821 245 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 ARL16Q0P5N6 197 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 NIT1Q86X76 327 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 MTCH1Q9NZJ7 389 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 C11orf94C9JXX5 98 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 PDE6DO43924 150 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 REG1AP05451 166 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 OR4C12Q96R67 309 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 DEFB127Q9H1M4 99 aa15.17■□□□□ 0.02
SNAPC3-205ENST00000467062 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 A0A1W2PR80 420 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 C1QTNF9P0C862 333 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 ZNF90Q03938 601 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 PMCHL1Q16048 86 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 TMEM211Q6ICI0 200 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 OR4A47Q6IF82 309 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 MRPL21Q7Z2W9 205 aaKnown RBP15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 GAPTQ8N292 157 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 SAA2-SAA4A0A096LPE2 208 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 F2Z2F3 143 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 FCN1O00602 326 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 HLA-DRB5Q30154 266 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 ZNF818PQ6ZRF7 136 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 MUC15Q8N387 334 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 LRFN3Q9BTN0 628 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 PRDM14Q9GZV8 571 aa15.16■□□□□ 0.02
SNAPC3-205ENST00000467062 ZNF891A8MT65 544 aaPredicted RBP15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 H0Y980 276 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 SYNGR2O43760 224 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 NPPCP23582 126 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 COLCA1Q6ZS62 124 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 SPSB4Q96A44 273 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 UHRF2Q96PU4 802 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 OR10V1Q8NGI7 309 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 OR10G9Q8NGN4 311 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 OR10G7Q8NGN6 311 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 B4GALT7Q9UBV7 327 aa15.15■□□□□ 0.02
SNAPC3-205ENST00000467062 TRBV9A0A0B4J1U6 114 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 KIAA1324LA8MWY0 1029 aaPredicted RBP15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 CD59P13987 128 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 STUMQ69YW2 141 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 C19orf35Q6ZS72 473 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 HAPLN4Q86UW8 402 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 KCNS1Q96KK3 526 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 WNT10AQ9GZT5 417 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 ZNF391Q9UJN7 358 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 PRR14LQ5THK1 2151 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 IGKV3D-15A0A087WSY6 115 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 UBE2L5PA0A1B0GUS4 154 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 CDX4O14627 284 aaPredicted RBP15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 DEGS1O15121 323 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 C3orf79P0CE67 100 aa15.14■□□□□ 0.01
SNAPC3-205ENST00000467062 TMEM164Q5U3C3 297 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms