RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
SDCCAG3-208ENST00000466579 SOX15O60248 233 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 BRI3O95415 125 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 CD3DP04234 171 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 IL6RP08887 468 aaPredicted RBP7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 SAA1P0DJI8 122 aaPredicted RBP7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 CDX1P47902 265 aaPredicted RBP7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 TAS2R19P59542 299 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 FXYD4P59646 89 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 PJVKQ0ZLH3 352 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 CATR1Q13166 79 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 PRSS8Q16651 343 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 VMA21Q3ZAQ7 101 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 ARRDC1Q8N5I2 433 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 WFDC9Q8NEX5 89 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 FAM110DQ8TAY7 271 aaPredicted RBP7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 CD300LFQ8TDQ1 290 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 TCTEX1D2Q8WW35 142 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 ARPC1AQ92747 370 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 TMEM68Q96MH6 324 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 GPHA2Q96T91 129 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 RSRP1Q9BUV0 290 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 C6orf62Q9GZU0 229 aaPredicted RBP7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 PARP11Q9NR21 331 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 FAM212BQ9NTI7 297 aaPredicted RBP7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 NDUFA13Q9P0J0 144 aa7.4□□□□□ -1.22
SDCCAG3-208ENST00000466579 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 M0QYG6 137 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 GPR31O00270 319 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TNFSF12O43508 249 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 RAMP3O60896 148 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 PGLYRP1O75594 196 aaPredicted RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 HRASP01112 189 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 RPLP1P05386 114 aaKnown RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 FGF2P09038 288 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 ZNF735P0CB33 412 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 PTBP1P26599 531 aaKnown RBP eCLIP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TAS2R31P59538 309 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TSPAN5P62079 268 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 RUNX1Q01196 453 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TMEM267Q0VDI3 215 aaPredicted RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 FXYD3Q14802 87 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 RNASE10Q5GAN6 216 aaKnown RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 CXorf66Q5JRM2 361 aaPredicted RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 LPCAT3Q6P1A2 487 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 ETV3LQ6ZN32 361 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TMEM17Q86X19 198 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 SPAG16Q8N0X2 631 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR5M8Q8NGP6 311 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 VSTM2AQ8TAG5 236 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TMEM167AQ8TBQ9 72 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 R3HDM4Q96D70 268 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 DGCR14Q96DF8 476 aaKnown RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 CLCC1Q96S66 551 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 AIFM2Q9BRQ8 373 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 TINAGL1Q9GZM7 467 aaPredicted RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 PLEKHA2Q9HB19 425 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 FOXA2Q9Y261 457 aaPredicted RBP7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 WSB1Q9Y6I7 421 aa7.39□□□□□ -1.23
SDCCAG3-208ENST00000466579 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 FABP12A6NFH5 140 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 H3BUA1 57 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 CREBL2O60519 120 aaPredicted RBP7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 KBTBD11O94819 623 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR2A4O95047 310 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 HPRT1P00492 218 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 F2RP25116 425 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 MAS1LP35410 378 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ETV6P41212 452 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 RAB9AP51151 201 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 RND3P61587 244 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 IL18Q14116 193 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 MEF2DQ14814 521 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 RNASE12Q5GAN4 147 aaKnown RBP7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ASPHD1Q5U4P2 390 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 FOXB2Q5VYV0 432 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 STEAP1BQ6NZ63 245 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 C18orf65Q6ZTR6 163 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 CCDC190Q86UF4 302 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ZNF695Q8IW36 515 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 MMD2Q8IY49 270 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 CMTM1Q8IZ96 169 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 SLC38A6Q8IZM9 456 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ZNF491Q8N8L2 437 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 LFNGQ8NES3 379 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR4D10Q8NGI6 311 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR4A5Q8NH83 315 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ZNF486Q96H40 463 aaPredicted RBP7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 RHOVQ96L33 236 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 UBE2E2Q96LR5 201 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 OR2A7Q96R45 310 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 P2RX4Q99571 388 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 DCUN1D5Q9BTE7 237 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 KLK15Q9H2R5 256 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ZNF430Q9H8G1 570 aaPredicted RBP7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 BET1LQ9NYM9 111 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 COMMD9Q9P000 198 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 V9GYH0 126 aa7.38□□□□□ -1.23
SDCCAG3-208ENST00000466579 ANKRD20A5PA0PJZ0 165 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms