RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 TMEM229BQ8NBD8 167 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 ZBTB34Q8NCN2 500 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 OSR1Q8TAX0 266 aaPredicted RBP9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 SMIM4Q8WVI0 70 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 PHB2Q99623 299 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 FBN3Q75N90 2809 aa9.45□□□□□ -0.9
SHROOM3-202ENST00000466541 MGAM2Q2M2H8 2515 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 A0A1W2PN81 502 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 ADARB2-AS1A8MUL3 147 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 GPR31O00270 319 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 ARPC1BO15143 372 aaKnown RBP9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 PGLYRP1O75594 196 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 IGF1P05019 195 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 SAA1P0DJI8 122 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 PI3P19957 117 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 CHRNA7P36544 502 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 KIR2DS2P43631 304 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 UBE2KP61086 200 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 MRPS10P82664 201 aaKnown RBP9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 TNXAQ16473 311 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 CXorf66Q5JRM2 361 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 TMEM65Q6PI78 240 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 ZNF562Q6V9R5 426 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 LFNGQ8NES3 379 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 BORCS5Q969J3 196 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 ZNF355PQ9NSJ1 428 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 NDUFA13Q9P0J0 144 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 RABL2AQ9UBK7 228 aaPredicted RBP9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
SHROOM3-202ENST00000466541 ACTL6BO94805 426 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 HRASP01112 189 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 CRYGBP07316 175 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 EGR2P11161 476 aaPredicted RBP9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 S100GP29377 79 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 RPL23AP62750 156 aaKnown RBP9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 TMEM267Q0VDI3 215 aaPredicted RBP9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 MSMO1Q15800 293 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 PRSS8Q16651 343 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 SPANXN2Q5MJ10 180 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 LPCAT3Q6P1A2 487 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 SLC38A6Q8IZM9 456 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 COMMD1Q8N668 190 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 TEX45Q8NA69 505 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 OR5T1Q8NG75 326 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 OR4F17Q8NGA8 305 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 MS4A10Q96PG2 267 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 OR5B12Q96R08 314 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 OR4F4Q96R69 305 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 SOSTQ9BQB4 213 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 THAP7Q9BT49 309 aaPredicted RBP9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 KLK15Q9H2R5 256 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 ZNF430Q9H8G1 570 aaPredicted RBP9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 HRASLSQ9HDD0 168 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 TNCP24821 2201 aa9.43□□□□□ -0.9
SHROOM3-202ENST00000466541 MSGN1A6NI15 193 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 DISC1C4P0D8 188 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 CTDSPLO15194 276 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 MPPED1O15442 326 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 GSTZ1O43708 216 aaPredicted RBP9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 OR2A4O95047 310 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 S1PR2O95136 353 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 PF4P02776 101 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 CD74P04233 296 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 AKAIN1P0CW23 69 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 TBPP20226 339 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 CFHR3Q02985 330 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 SSBP1Q04837 148 aaKnown RBP9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 FOXE3Q13461 319 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 MEF2DQ14814 521 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 C10orf55Q5SWW7 151 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 Q8N402 240 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 OR4C16Q8NGL9 310 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 MARCH1Q8TCQ1 289 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 RHOVQ96L33 236 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 OR2A7Q96R45 310 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 RSRP1Q9BUV0 290 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 FOXA2Q9Y261 457 aaPredicted RBP9.42□□□□□ -0.9
SHROOM3-202ENST00000466541 HPRT1P00492 218 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 IGHG4P01861 327 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 ELANEP08246 267 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 LPAR6P43657 344 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 RAB25P57735 213 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 SSBP2P81877 361 aaPredicted RBP9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 MRGPRG-AS1Q2M3A8 158 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 DEFB136Q30KP8 78 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 OR6Q1Q8NGQ2 317 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 TERB2Q8NHR7 220 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 NUBP2Q9Y5Y2 271 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 V9GYH0 126 aa9.41□□□□□ -0.9
SHROOM3-202ENST00000466541 ANKRD20A5PA0PJZ0 165 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms