RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 OR6Q1Q8NGQ2 317 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 GRPEL2Q8TAA5 225 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 OSR1Q8TAX0 266 aaPredicted RBP9.14□□□□□ -0.95
CUX1-207ENST00000465461 THAP7Q9BT49 309 aaPredicted RBP9.14□□□□□ -0.95
CUX1-207ENST00000465461 GPR31O00270 319 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 GSTZ1O43708 216 aaPredicted RBP9.13□□□□□ -0.95
CUX1-207ENST00000465461 CNIH1O95406 144 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 APELAP0DMC3 54 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 PGAM2P15259 253 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 PPIFP30405 207 aaKnown RBP9.13□□□□□ -0.95
CUX1-207ENST00000465461 UBE2KP61086 200 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 CATR1Q13166 79 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 MSMO1Q15800 293 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 C2orf68Q2NKX9 166 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 TEX38Q6PEX7 206 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 UNQ5815/PRO19632Q6UWF5 114 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 TREML4Q6UXN2 200 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 ZNF562Q6V9R5 426 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 CCDC190Q86UF4 302 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 LHFPL1Q86WI0 220 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 LFNGQ8NES3 379 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 OR4S2Q8NH73 311 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 MRGPRFQ96AM1 343 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 KLK15Q9H2R5 256 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 NDUFA13Q9P0J0 144 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 TSSC4Q9Y5U2 329 aaPredicted RBP9.13□□□□□ -0.95
CUX1-207ENST00000465461 NUBP2Q9Y5Y2 271 aa9.13□□□□□ -0.95
CUX1-207ENST00000465461 A0A1W2PN81 502 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 ANKRD20A5PA0PJZ0 165 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 SOX15O60248 233 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 S1PR2O95136 353 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 MYOD1P15172 320 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 CHRNA7P36544 502 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 TNXAQ16473 311 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 PRSS8Q16651 343 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 C10orf55Q5SWW7 151 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 TEX45Q8NA69 505 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 OR5T1Q8NG75 326 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 OR4C16Q8NGL9 310 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 MARCH1Q8TCQ1 289 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 ARPC1AQ92747 370 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 R3HDM4Q96D70 268 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 ZNF430Q9H8G1 570 aaPredicted RBP9.12□□□□□ -0.95
CUX1-207ENST00000465461 RABL2AQ9UBK7 228 aaPredicted RBP9.12□□□□□ -0.95
CUX1-207ENST00000465461 RABL2BQ9UNT1 228 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 ANK2Q01484 3957 aa9.12□□□□□ -0.95
CUX1-207ENST00000465461 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 A6NHS1 94 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 IGHG4P01861 327 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 OPN1MWP04001 364 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 AKAIN1P0CW23 69 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 OPN1MW2P0DN77 364 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 OPN1MW3P0DN78 364 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 PF4V1P10720 104 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 KIR2DS2P43631 304 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 LPAR6P43657 344 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 UCP3P55916 312 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 RPL23AP62750 156 aaKnown RBP9.11□□□□□ -0.95
CUX1-207ENST00000465461 SSBP1Q04837 148 aaKnown RBP9.11□□□□□ -0.95
CUX1-207ENST00000465461 ZNF585BQ52M93 769 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 C19orf54Q5BKX5 351 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 ASPHD1Q5U4P2 390 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 LPCAT3Q6P1A2 487 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 CMTM1Q8IZ96 169 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 SLC38A6Q8IZM9 456 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 PUSL1Q8N0Z8 303 aaKnown RBP9.11□□□□□ -0.95
CUX1-207ENST00000465461 Q8N402 240 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 ARRDC1Q8N5I2 433 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 MINDY2Q8NBR6 621 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 OR13C8Q8NGS7 320 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 TERB2Q8NHR7 220 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 MS4A10Q96PG2 267 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 GON7Q9BXV9 100 aa9.11□□□□□ -0.95
CUX1-207ENST00000465461 NUDT19A8MXV4 375 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 DISC1C4P0D8 188 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 E7EUB6 86 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 OR2A4O95047 310 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 HPRT1P00492 218 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 TBPP20226 339 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 PSMB8P28062 276 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 CRIP2P52943 208 aaPredicted RBP9.1□□□□□ -0.95
CUX1-207ENST00000465461 DEFA5Q01523 94 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 FOXE3Q13461 319 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 MEF2DQ14814 521 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 CXorf66Q5JRM2 361 aaPredicted RBP9.1□□□□□ -0.95
CUX1-207ENST00000465461 OR4A47Q6IF82 309 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 POC5Q8NA72 575 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 KLHL30-AS1Q8NEE0 82 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 OR51S1Q8NGJ8 323 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 BORCS5Q969J3 196 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 TRIM63Q969Q1 353 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 RHOVQ96L33 236 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 OR5B12Q96R08 314 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 OR2A7Q96R45 310 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 PHB2Q99623 299 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms