RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 Q6ZR03 302 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 ACOT7LQ6ZUV0 252 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 HIST2H3AQ71DI3 136 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 DPPA2Q7Z7J5 298 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 OR5AS1Q8N127 324 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 ZNF786Q8N393 782 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 FTMTQ8N4E7 242 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 C11orf45Q8TAV5 145 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 KLF14Q8TD94 323 aaPredicted RBP3.14□□□□□ -1.91
UBR4-209ENST00000465036 BCL2L14Q9BZR8 327 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 METTL8Q9H825 291 aaKnown RBP3.14□□□□□ -1.91
UBR4-209ENST00000465036 MOB1AQ9H8S9 216 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 ISYNA1Q9NPH2 558 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 CYB5R1Q9UHQ9 305 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 KLHL21Q9UJP4 597 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 FBXL3Q9UKT7 428 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 POLR1DQ9Y2S0 133 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
UBR4-209ENST00000465036 CMYA5Q8N3K9 4069 aa3.14□□□□□ -1.91
UBR4-209ENST00000465036 YLPM1P49750 1951 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 MALRD1Q5VYJ5 2156 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 IGHV3OR16-12A0A075B7B8 117 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 IGKV1D-8A0A087WSZ0 117 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 ZNF816-ZNF321PA0A0X1KG74 233 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 VGLL3A8MV65 326 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 SMKR1H3BMG3 65 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 K7EQG2 157 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 ZNF593O00488 134 aaPredicted RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 GNGT2O14610 69 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CD5LO43866 347 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 EIF3GO75821 320 aaKnown RBP eCLIP3.13□□□□□ -1.91
UBR4-209ENST00000465036 PTHP01270 115 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 HLA-DPB1P04440 258 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CT45A6P0DMU7 189 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CT45A5P0DMU8 189 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CT45A7P0DMV0 189 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 COX5BP10606 129 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 SLC2A1P11166 492 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 USF1P22415 310 aaPredicted RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 POLR2IP36954 125 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 RPL29P47914 159 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 EVX1P49640 407 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 RGS6P49758 472 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 HCCSP53701 268 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 RPS23P62266 143 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 RPL31P62899 125 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 ARL6IP1Q15041 203 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CNPY1Q3B7I2 92 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CT45A1Q5HYN5 189 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 C1orf146Q5VVC0 180 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 DNM1P34Q6PK57 102 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 C12orf54Q6X4T0 127 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 GDPD3Q7L5L3 318 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 SLC25A42Q86VD7 318 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 LINC00471Q8N535 108 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 BEST4Q8NFU0 473 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 OR10AD1Q8NGE0 317 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 OR52L1Q8NGH7 329 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 OR2AE1Q8NHA4 323 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CLDND2Q8NHS1 167 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CT45A3Q8NHU0 189 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 TEX47Q8TBZ9 253 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 RNASEH2CQ8TDP1 164 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 PYDC1Q8WXC3 89 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CMBLQ96DG6 245 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 ZMYND19Q96E35 227 aaPredicted RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 PGLYRP4Q96LB8 373 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 PITX2Q99697 317 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 ATF6BQ99941 703 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 AGMATQ9BSE5 352 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 OR51V1Q9H2C8 321 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 PARLQ9H300 379 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 RNF167Q9H6Y7 350 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 IFT46Q9NQC8 304 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 CMC2Q9NRP2 79 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 PLEKHJ1Q9NW61 149 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 RHBDL2Q9NX52 303 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 TBL2Q9Y4P3 447 aaKnown RBP3.13□□□□□ -1.91
UBR4-209ENST00000465036 AUP1Q9Y679 476 aa3.13□□□□□ -1.91
UBR4-209ENST00000465036 ATRQ13535 2644 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 FBN1P35555 2871 aaKnown RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 ARRDC5A6NEK1 342 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 RIIAD1A6NNX1 92 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 F6UB75 175 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 H7C2Y5 167 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 M0R135 149 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 MAGEB4O15481 346 aaPredicted RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 MRPL3P09001 348 aaKnown RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 CSF3P09919 207 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 OCM2P0CE71 109 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 ZNF823P16415 610 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 ZBTB25P24278 435 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 FMO3P31513 532 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 PMELP40967 661 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 GPR6P46095 362 aaPredicted RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 TGM4P49221 684 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 SLC25A1P53007 311 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 CEBPGP53567 150 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms