RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PDLIM3Q53GG5 364 aaPredicted RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 OR10J3Q5JRS4 329 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 SPATA46Q5T0L3 261 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 DCAF12Q5T6F0 453 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 WDR73Q6P4I2 378 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 PPP1R32Q7Z5V6 425 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 SPEM1Q8N4L4 309 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 SIGLECL1Q8N7X8 197 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OR52E5Q8NH55 327 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 SFXN3Q9BWM7 321 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 GGTLC1Q9BX51 225 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 HES4Q9HCC6 221 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 MSL2Q9HCI7 577 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 FBXL7Q9UJT9 491 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 ASCC3Q8N3C0 2202 aaKnown RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 PRSS46E5RG02 174 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 K7EN84 100 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 FCN1O00602 326 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 RBMXL2O75526 392 aaKnown RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 MT-CO2P00403 227 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 MT-CO3P00414 261 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 HBZP02008 142 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 GPX1P07203 203 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 TDGF1P13385 188 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 CD33P20138 364 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 BMP5P22003 454 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 GCHFRP30047 84 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 CYB561P49447 251 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 RAB7AP51149 207 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 Q0VFX4 171 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 PSG7Q13046 419 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OR5I1Q13606 314 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OR1C1Q15619 314 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 KRTCAP3Q53RY4 240 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 TREML4Q6UXN2 200 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 LRP11Q86VZ4 500 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 C1orf174Q8IYL3 243 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OR2M7Q8NG81 312 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OR52L2PQ8NGH6 319 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 IFI44Q8TCB0 444 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 FAM216AQ8WUB2 273 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 NANOS1Q8WY41 292 aaKnown RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 NINJ1Q92982 152 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 SLC35E1Q96K37 410 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 UHRF2Q96PU4 802 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 MGST2Q99735 147 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 LRFN3Q9BTN0 628 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 OPN3Q9H1Y3 402 aaPredicted RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 UQCR10Q9UDW1 63 aa6.08□□□□□ -1.44
USP48-206ENST00000464577 YTHDF2Q9Y5A9 579 aaKnown RBP6.08□□□□□ -1.44
USP48-206ENST00000464577 SNURFLB1AK76 121 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 DIRC3C9JPN6 131 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 RRHO14718 337 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 SPINK2P20155 84 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 CHRNB4P30926 498 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 VDAC2P45880 294 aaPredicted RBP6.07□□□□□ -1.44
USP48-206ENST00000464577 THBS3P49746 956 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 PLGLB1Q02325 96 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 HLA-DRB5Q30154 266 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 SPINK9Q5DT21 86 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 ZNF766Q5HY98 468 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 FBXW9Q5XUX1 488 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 MMD2Q8IY49 270 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 EAF1Q96JC9 268 aaPredicted RBP6.07□□□□□ -1.44
USP48-206ENST00000464577 KCNS1Q96KK3 526 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 PHF7Q9BWX1 381 aaPredicted RBP6.07□□□□□ -1.44
USP48-206ENST00000464577 MS4A5Q9H3V2 200 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 B4GALT7Q9UBV7 327 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 V9GYV3 84 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 KMT2EQ8IZD2 1858 aa6.07□□□□□ -1.44
USP48-206ENST00000464577 LINC00473A8K010 186 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 SLC17A3O00476 420 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 NTN3O00634 580 aaPredicted RBP6.06□□□□□ -1.44
USP48-206ENST00000464577 SIAH2O43255 324 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 PSPNO60542 156 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 ZNF253O75346 499 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 OR5G3P0C626 314 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 OR9G9P0C7N8 305 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 IER3P46695 156 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 RHOBP62745 196 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 RPL31P62899 125 aaKnown RBP6.06□□□□□ -1.44
USP48-206ENST00000464577 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
USP48-206ENST00000464577 BATFQ16520 125 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 MIC13Q5XKP0 118 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 MCEMP1Q8IX19 187 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 C11orf42Q8N5U0 333 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 ORAOV1Q8WV07 137 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 BCL2L2Q92843 193 aaPredicted RBP6.06□□□□□ -1.44
USP48-206ENST00000464577 FAM173AQ9BQD7 235 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 GNB4Q9HAV0 340 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 LSM4Q9Y4Z0 139 aaKnown RBP6.06□□□□□ -1.44
USP48-206ENST00000464577 YLPM1P49750 1951 aaKnown RBP6.06□□□□□ -1.44
USP48-206ENST00000464577 FAM166BA8MTA8 275 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 F2Z2F3 143 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 AQP7O14520 342 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 IGLC2P0DOY2 106 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 IGLC3P0DOY3 106 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 CCL4P13236 92 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 HNF1AP20823 631 aa6.06□□□□□ -1.44
USP48-206ENST00000464577 KRTDAPP60985 99 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms