RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CCDC90BQ9GZT6 254 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 KCNIP2Q9NS61 270 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 ACER3Q9NUN7 267 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 UQCC1Q9NVA1 299 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 GSKIPQ9P0R6 139 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 DHCR7Q9UBM7 475 aaKnown RBP2.82□□□□□ -1.96
PTCD3-205ENST00000464541 PRNDQ9UKY0 176 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 PAIP2BQ9ULR5 123 aaKnown RBP2.82□□□□□ -1.96
PTCD3-205ENST00000464541 NOS1P29475 1434 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 DCCP43146 1447 aa2.82□□□□□ -1.96
PTCD3-205ENST00000464541 IGHV1-45A0A0A0MS14 117 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 IGHV3-72A0A0B4J1Y9 119 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 TRAV26-2A0A0B4J265 109 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 FAM236DA0A1B0GTK5 79 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 IGSF23A1L1A6 192 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 PRORSD1PA6NEY8 169 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 ZNF98A6NK75 572 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 ARPC5O15511 151 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 APOMO95445 188 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 IGLV2-8P01709 118 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 IGLV3-25P01717 112 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 IGHMP01871 453 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 FAM236CP0DP71 79 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 SPI1P17947 270 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 S100A1P23297 94 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 CA7P43166 264 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 TPI1P60174 286 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 CDC42P60953 191 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 HOXC5Q00444 222 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 KCNJ8Q15842 424 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM241Q24JQ0 296 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 PLPPR5Q32ZL2 321 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 LINC00303Q3SY05 128 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 C9orf64Q5T6V5 341 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 OR2M3Q8NG83 312 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 OR8B12Q8NGG6 310 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 OR2T27Q8NH04 317 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 C2orf15Q8WU43 125 aaKnown RBP2.81□□□□□ -1.96
PTCD3-205ENST00000464541 ACOT12Q8WYK0 555 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 GPR146Q96CH1 333 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 MALSU1Q96EH3 234 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM147Q9BVK8 224 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 SS18L2Q9UHA2 77 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 AK3Q9UIJ7 227 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM56-RWDD3S4R434 201 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 ARHGEF10O15013 1369 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 NUP160Q12769 1436 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 WRNQ14191 1432 aaPredicted RBP eCLIP2.81□□□□□ -1.96
PTCD3-205ENST00000464541 GRIN2BQ13224 1484 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 ANKRD12Q6UB98 2062 aa2.81□□□□□ -1.96
PTCD3-205ENST00000464541 DYSFO75923 2080 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 IGHV3-49A0A0A0MS15 119 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 TRAPPC13A5PLN9 417 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 INMT-MINDY4F8WBC2 141 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-205ENST00000464541 PIRO00625 290 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 GSTZ1O43708 216 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-205ENST00000464541 HLA-DQB2P05538 268 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 C8GP07360 202 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 AP1S1P61966 158 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 GNG5P63218 68 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 DEFB115Q30KQ5 88 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 SCGB2B2Q4G0G5 96 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 KLHL12Q53G59 568 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 MRPL2Q5T653 305 aaKnown RBP2.8□□□□□ -1.96
PTCD3-205ENST00000464541 TMEM78Q5T7P6 136 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 EBLN2Q6P2I7 272 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 BRD3OSQ6XYD6 125 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 LRP11Q86VZ4 500 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 KLF14Q8TD94 323 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-205ENST00000464541 MBD3L1Q8WWY6 194 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 REEP6Q96HR9 211 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 C18orf15Q96N68 181 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 IP6K3Q96PC2 410 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 NMNAT3Q96T66 252 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 CCDC32Q9BV29 185 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 RNASE7Q9H1E1 156 aaKnown RBP2.8□□□□□ -1.96
PTCD3-205ENST00000464541 C21orf62Q9NYP8 219 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 ANAPC10Q9UM13 185 aa2.8□□□□□ -1.96
PTCD3-205ENST00000464541 hCG_1818297A0A087WSY0 165 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 A8MT66 165 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 MFSD11O43934 449 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 SEC11BP0C7V7 166 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 PPIBP23284 216 aaKnown RBP2.79□□□□□ -1.96
PTCD3-205ENST00000464541 CDK2P24941 298 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 S100A2P29034 98 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 NCALDP61601 193 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 RBX1P62877 108 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 RUNX1Q01196 453 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 MEF2BQ02080 365 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-205ENST00000464541 BTN1A1Q13410 526 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 SURF2Q15527 256 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-205ENST00000464541 GRK1Q15835 563 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 IBA57Q5T440 356 aaKnown RBP2.79□□□□□ -1.96
PTCD3-205ENST00000464541 GLT8D1Q68CQ7 371 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
PTCD3-205ENST00000464541 BAP18Q8IXM2 172 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 OR2T4Q8NH00 348 aa2.79□□□□□ -1.96
PTCD3-205ENST00000464541 ZNF675Q8TD23 568 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms