RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TMEM14EPQ6UXP3 125 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 DPPA3Q6W0C5 159 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 YPEL2Q96QA6 119 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 NCOR1P1Q9H4R4 102 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 CHODLQ9H9P2 273 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-205ENST00000464187 CALYQ9NYX4 217 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 OR6C3Q9NZP0 311 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 CTSZQ9UBR2 303 aa11.93□□□□□ -0.5
COL5A1-205ENST00000464187 TET2Q6N021 2002 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-205ENST00000464187 CRYBG3Q68DQ2 2970 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 BTBD17A6NE02 478 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 EFNA4P52798 201 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 SMUG1Q53HV7 270 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 LILRB2Q8N423 598 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 SCGB1C1Q8TD33 95 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 FAM216AQ8WUB2 273 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 IGFBPL1Q8WX77 278 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 RARRES2Q99969 163 aa11.92□□□□□ -0.5
COL5A1-205ENST00000464187 DVL1O14640 695 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 NDUFB3O43676 98 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 CGB3P0DN86 165 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 CGB7P0DN87 165 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 SLC38A11Q08AI6 406 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 C17orf58Q2M2W7 97 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 LRRC75BQ2VPJ9 315 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 LRRC10Q5BKY1 277 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 H2BFWTQ7Z2G1 175 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 RAB1CQ92928 201 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 TIMD4Q96H15 378 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 CCL19Q99731 98 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 SLC35B3Q9H1N7 401 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 IFI27L2Q9H2X8 130 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 KIAA1456Q9P272 454 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 CLN8Q9UBY8 286 aa11.91□□□□□ -0.5
COL5A1-205ENST00000464187 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 SLC31A2O15432 143 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 COL8A1P27658 744 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 ZNF134P52741 427 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 UTF1Q5T230 341 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 ETV3LQ6ZN32 361 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 R3HDM4Q96D70 268 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-205ENST00000464187 PARD6GQ9BYG4 376 aaPredicted RBP11.9□□□□□ -0.5
COL5A1-205ENST00000464187 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 YLPM1P49750 1951 aaKnown RBP11.9□□□□□ -0.5
COL5A1-205ENST00000464187 TRGV10A0A0A0MS01 117 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 RBFOX3A6NFN3 312 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 M0R1X1 148 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 OR8G2PQ6IF36 304 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 TCF23Q7RTU1 214 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 CD300LFQ8TDQ1 290 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 SFT2D1Q8WV19 159 aa11.9□□□□□ -0.5
COL5A1-205ENST00000464187 WDR61Q9GZS3 305 aaKnown RBP11.9□□□□□ -0.5
COL5A1-205ENST00000464187 UBE2L5PA0A1B0GUS4 154 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 FCGR3BO75015 233 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 OR9G9P0C7N8 305 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 OR13C7P0DN81 318 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 RPL31P62899 125 aaKnown RBP11.89□□□□□ -0.51
COL5A1-205ENST00000464187 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 AWAT1Q58HT5 328 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 VSIRQ9H7M9 311 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
COL5A1-205ENST00000464187 USP9YO00507 2555 aaPredicted RBP11.89□□□□□ -0.51
COL5A1-205ENST00000464187 hADV38S2A0JD32 116 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 PMS2P5A8MQ11 134 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 HBE1P02100 147 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-205ENST00000464187 HAGHQ16775 308 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 TMEM155Q4W5P6 130 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 H1FXQ92522 213 aaKnown RBP11.88□□□□□ -0.51
COL5A1-205ENST00000464187 CORO2AQ92828 525 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 LEAP2Q969E1 77 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 AIFM2Q9BRQ8 373 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 RPRMQ9NS64 109 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 LINC00312Q9Y6C7 94 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 TENM4Q6N022 2769 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 TACC2O95359 2948 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 KBTBD11-OT1A0A1B0GTJ5 212 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 HPRT1P00492 218 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 IGHV4-39P01824 125 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 AKR1C3P42330 323 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 GPR6P46095 362 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-205ENST00000464187 ICAM4Q14773 271 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF726P1Q15940 193 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF506Q5JVG8 444 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF841Q6ZN19 808 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
COL5A1-205ENST00000464187 CLDND2Q8NHS1 167 aa11.88□□□□□ -0.51
COL5A1-205ENST00000464187 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms