RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 NPPBP16860 134 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 GNG4P50150 75 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 TCL1AP56279 114 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 PLP2Q04941 152 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 Q0VG73 95 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 C5orf47Q569G3 176 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 DCAF12Q5T6F0 453 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 LINC01590Q5TEZ4 76 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 PMS2CLQ68D20 193 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 C6orf15Q6UXA7 325 aaPredicted RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 BPIFA4PQ86YQ2 179 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 TCEAL8Q8IYN2 117 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 DDB2Q92466 427 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 OR8B2Q96RD0 313 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SDF2Q99470 211 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 NRTNQ99748 197 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 PKIBQ9C010 78 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 C6orf106Q9H6K1 298 aaPredicted RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 TECRQ9NZ01 308 aaKnown RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 B4GALT6Q9UBX8 382 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 EMC9Q9Y3B6 208 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 MCM3APO60318 1980 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 A0A0A6YYD4 124 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 LOC107986453A0A1B0GWG9 222 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CCDC179H3BU77 68 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CDX4O14627 284 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 NDUFB4O95168 129 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 DEFA4P12838 97 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 ATP1B2P14415 290 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 MDH2P40926 338 aaKnown RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 VDAC2P45880 294 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TAS2R46P59540 309 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TIGITQ495A1 244 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM97Q5BJF2 176 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 GCSAMLQ5JQS6 135 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 C1orf140Q5VVS0 124 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 SHISA6Q6ZSJ9 500 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 RNF144BQ7Z419 303 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 LHFPL1Q86WI0 220 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 SYT8Q8NBV8 401 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM116Q8NCL8 245 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 OSR1Q8TAX0 266 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 PAAF1Q9BRP4 392 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 COMMD5Q9GZQ3 224 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 OBP2BQ9NPH6 170 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 THAP10Q9P2Z0 257 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 KCNS2Q9ULS6 477 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CYSLTR1Q9Y271 337 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 WNT6Q9Y6F9 365 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 GPR179Q6PRD1 2367 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 IGKV1D-8A0A087WSZ0 117 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TRAV1-1A0A0B4J248 108 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TRAV25A0A0B4J276 109 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 A0A1B0GWA3 101 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 C11orf94C9JXX5 98 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 H3BRM9 83 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CHEK1O14757 476 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CHST1O43916 411 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CEACAM4O75871 244 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 FCGR2BP31994 310 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 PAX9P55771 341 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 SEC11AP67812 179 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM187Q14656 261 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF141Q15928 474 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TNXAQ16473 311 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 SP5Q6BEB4 398 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 MRPL54Q6P161 138 aaKnown RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 ACSM6Q6P461 480 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 SSX8Q7RTT4 187 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TPRX1Q8N7U7 411 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 LRTM2Q8N967 370 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 OR10G8Q8NGN5 311 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 DDIT4LQ96D03 193 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 NEIL1Q96FI4 390 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 GPHA2Q96T91 129 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 HDHD3Q9BSH5 251 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 TPPP3Q9BW30 176 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 NAA60Q9H7X0 242 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF257Q9Y2Q1 563 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 UBE2J1Q9Y385 318 aaPredicted RBP3.03□□□□□ -1.92
COL8A1-205ENST00000463753 SCN8AQ9UQD0 1980 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 FBN3Q75N90 2809 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 DOCK9Q9BZ29 2069 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 MYO9BQ13459 2157 aa3.03□□□□□ -1.92
COL8A1-205ENST00000463753 VCANP13611 3396 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 IGLV3-10A0A075B6K4 115 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 TRBV5-4A0A0C4DH59 114 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 LOC101059948A0A1B0GTJ6 334 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 SH2D7A6NKC9 451 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM250H0YL14 139 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 K7ENP7 123 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 TNFRSF13BO14836 293 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 MLNRO43193 412 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 ADAM20O43506 726 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 B3GALT2O43825 422 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 LDB3O75112 727 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 KLF7O75840 302 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM50AO95807 157 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 ISG15P05161 165 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms