RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SAA1P0DJI8 122 aaPredicted RBP13.81□□□□□ -0.2
VPS52-214ENST00000463486 HERV-K104P61576 105 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 MRPS10P82664 201 aaKnown RBP13.81□□□□□ -0.2
VPS52-214ENST00000463486 PRSS8Q16651 343 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 AKIRIN2Q53H80 203 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 IDO2Q6ZQW0 420 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 LHFPL1Q86WI0 220 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 TMEM229BQ8NBD8 167 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 OR4D10Q8NGI6 311 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
VPS52-214ENST00000463486 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
VPS52-214ENST00000463486 UCP3P55916 312 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 SSBP1Q04837 148 aaKnown RBP13.8□□□□□ -0.2
VPS52-214ENST00000463486 CBX3Q13185 183 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 FXYD3Q14802 87 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 ACTBL2Q562R1 376 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 ETV3LQ6ZN32 361 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
VPS52-214ENST00000463486 WFDC9Q8NEX5 89 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 OR4F17Q8NGA8 305 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 OR4S2Q8NH73 311 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 OR4F4Q96R69 305 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 RSRP1Q9BUV0 290 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 RABL2AQ9UBK7 228 aaPredicted RBP13.8□□□□□ -0.2
VPS52-214ENST00000463486 RABL2BQ9UNT1 228 aa13.8□□□□□ -0.2
VPS52-214ENST00000463486 DPPA5A6NC42 116 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 GSTZ1O43708 216 aaPredicted RBP13.79□□□□□ -0.2
VPS52-214ENST00000463486 IL6RP08887 468 aaPredicted RBP13.79□□□□□ -0.2
VPS52-214ENST00000463486 ZNF735P0CB33 412 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 TBPP20226 339 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 CDX1P47902 265 aaPredicted RBP13.79□□□□□ -0.2
VPS52-214ENST00000463486 TSPAN5P62079 268 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 IL18Q14116 193 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 VMA21Q3ZAQ7 101 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 LFNGQ8NES3 379 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 ARPC1AQ92747 370 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 MRGPRFQ96AM1 343 aa13.79□□□□□ -0.2
VPS52-214ENST00000463486 ZNF430Q9H8G1 570 aaPredicted RBP13.79□□□□□ -0.2
VPS52-214ENST00000463486 FABP12A6NFH5 140 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 GPR31O00270 319 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 KIR2DS2P43631 304 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 ECSCRQ19T08 205 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 CXorf66Q5JRM2 361 aaPredicted RBP13.78□□□□□ -0.2
VPS52-214ENST00000463486 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 ARRDC1Q8N5I2 433 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 BORCS5Q969J3 196 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 DGCR14Q96DF8 476 aaKnown RBP13.78□□□□□ -0.2
VPS52-214ENST00000463486 V9GYH0 126 aa13.78□□□□□ -0.2
VPS52-214ENST00000463486 RAB9AP51151 201 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 TAS2R19P59542 299 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 POU2AF1Q16633 256 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 ZNF585BQ52M93 769 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 RNASE10Q5GAN6 216 aaKnown RBP13.77□□□□□ -0.21
VPS52-214ENST00000463486 KHDC1LQ5JSQ8 128 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 STEAP1BQ6NZ63 245 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 ZNF695Q8IW36 515 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 TCTEX1D1Q8N7M0 179 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 ZNF491Q8N8L2 437 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 OR51H1Q8NH63 302 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 TMEM167AQ8TBQ9 72 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 RHOVQ96L33 236 aa13.77□□□□□ -0.21
VPS52-214ENST00000463486 FOXA2Q9Y261 457 aaPredicted RBP13.77□□□□□ -0.21
VPS52-214ENST00000463486 RLN1P04808 185 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 F2RP25116 425 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 SLC6A1P30531 599 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 GNB1P62873 340 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 TMEM267Q0VDI3 215 aaPredicted RBP13.76□□□□□ -0.21
VPS52-214ENST00000463486 CATR1Q13166 79 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 UNQ5815/PRO19632Q6UWF5 114 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 GRPEL2Q8TAA5 225 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 CASTOR1Q8WTX7 329 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 P2RX4Q99571 388 aa13.76□□□□□ -0.21
VPS52-214ENST00000463486 PRKDCP78527 4128 aaKnown RBP13.76□□□□□ -0.21
VPS52-214ENST00000463486 A0A1B0GW64 132 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 A0A1W2PN81 502 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 ANKRD20A5PA0PJZ0 165 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 E7EUB6 86 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 KBTBD11O94819 623 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 OR2A4O95047 310 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 CNIH1O95406 144 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 RAB3DO95716 219 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 HPRT1P00492 218 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 CHRNA7P36544 502 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 TAS2R31P59538 309 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 ZNF79Q15937 498 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 OR4A47Q6IF82 309 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 LPCAT3Q6P1A2 487 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 CMTM1Q8IZ96 169 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 SLC38A6Q8IZM9 456 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 TERB2Q8NHR7 220 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 ABHD5Q8WTS1 349 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms