RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 TFF3Q07654 80 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 ZNF672Q499Z4 452 aaPredicted RBP8.33□□□□□ -1.08
MSH5-211ENST00000463144 SLC25A24Q6NUK1 477 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 HEPN1Q6WQI6 88 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 SCGB1C1Q8TD33 95 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 PARD6GQ9BYG4 376 aaPredicted RBP8.33□□□□□ -1.08
MSH5-211ENST00000463144 TMEM140Q9NV12 185 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
MSH5-211ENST00000463144 C15orf62A8K5M9 175 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 H2AFB1P0C5Y9 115 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 NPBWR1P48145 328 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 TMEM30BQ3MIR4 351 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 AKR1C8PQ5T2L2 129 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 MUC15Q8N387 334 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 OR10A7Q8NGE5 316 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 OR4S2Q8NH73 311 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 CA5BP1Q8WTZ4 195 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 H1FXQ92522 213 aaKnown RBP8.32□□□□□ -1.08
MSH5-211ENST00000463144 TAF15Q92804 592 aaKnown RBP eCLIP8.32□□□□□ -1.08
MSH5-211ENST00000463144 ZNF714Q96N38 554 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
MSH5-211ENST00000463144 RARRES2Q99969 163 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 TMEM204Q9BSN7 226 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 EIF5A2Q9GZV4 153 aaKnown RBP8.32□□□□□ -1.08
MSH5-211ENST00000463144 GAL3ST2Q9H3Q3 398 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 RPRMQ9NS64 109 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 UBE2L5PA0A1B0GUS4 154 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 IFNA17P01571 189 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 PPT1P50897 306 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 DLX6P56179 175 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 PEA15Q15121 130 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 LRRC10Q5BKY1 277 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 OR4A16Q8NH70 328 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
MSH5-211ENST00000463144 HIPK2Q9H2X6 1198 aa8.32□□□□□ -1.08
MSH5-211ENST00000463144 A0A1B0GW64 132 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 TSPAN4O14817 238 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 DAOP14920 347 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
MSH5-211ENST00000463144 SPCS3P61009 180 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 ERVK-16P61578 105 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 GNB2P62879 340 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 ZNF726P1Q15940 193 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 PDLIM3Q53GG5 364 aaPredicted RBP8.31□□□□□ -1.08
MSH5-211ENST00000463144 OR4A47Q6IF82 309 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 ZNF833PQ6ZTB9 187 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 SSX7Q7RTT5 188 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 LFNGQ8NES3 379 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 OR52E5Q8NH55 327 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 ADTRPQ96IZ2 230 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 RHOVQ96L33 236 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 SRRM4A7MD48 611 aaKnown RBP8.31□□□□□ -1.08
MSH5-211ENST00000463144 IGKV1-16P04430 117 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 ARG1P05089 322 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 IL6RP08887 468 aaPredicted RBP8.31□□□□□ -1.08
MSH5-211ENST00000463144 TAGLNQ01995 201 aaKnown RBP8.31□□□□□ -1.08
MSH5-211ENST00000463144 HNF4GQ14541 408 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 ATP6V1FQ16864 119 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 HFEQ30201 348 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 CENPVQ7Z7K6 275 aaPredicted RBP8.31□□□□□ -1.08
MSH5-211ENST00000463144 C11orf42Q8N5U0 333 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 OR10P1Q8NGE3 313 aa8.31□□□□□ -1.08
MSH5-211ENST00000463144 HRNRQ86YZ3 2850 aaPredicted RBP8.3□□□□□ -1.08
MSH5-211ENST00000463144 NBASA2RRP1 2371 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 RBFOX3A6NFN3 312 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 MYOD1P15172 320 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 MDKP21741 143 aaPredicted RBP8.3□□□□□ -1.08
MSH5-211ENST00000463144 SERF2P84101 59 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 TLE4Q04727 773 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 POU2AF1Q16633 256 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 VWC2Q2TAL6 325 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 TMEM88Q6PEY1 159 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 ZNF429Q86V71 674 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 TMEM147Q9BVK8 224 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 TCF19Q9Y242 345 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 COL6A6A6NMZ7 2263 aa8.3□□□□□ -1.08
MSH5-211ENST00000463144 BTBD17A6NE02 478 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 C15orf61A6NNL5 157 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 RRHO14718 337 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 NDUFA2O43678 99 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 SNAPINO95295 136 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 IGKV1D-33P01593 117 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 IGKV1-33P01594 117 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 DIAPH2-AS1Q14236 149 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 TMEM155Q4W5P6 130 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 ZNF841Q6ZN19 808 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 CBLN2Q8IUK8 224 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 ABHD12Q8N2K0 398 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 PBDC1Q9BVG4 233 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 MRPL20Q9BYC9 149 aaKnown RBP8.29□□□□□ -1.08
MSH5-211ENST00000463144 SLC35D1Q9NTN3 355 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 TMEM14BQ9NUH8 114 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 KIAA1456Q9P272 454 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 TRAV1-1A0A0B4J248 108 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms