RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 ARG1P05089 322 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 SSTR5P35346 364 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 MAS1LP35410 378 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 CHRNA7P36544 502 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 PPP1CCP36873 323 aaKnown RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 LPAR6P43657 344 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 LGALS7P47929 136 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 PRRX1P54821 245 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 RPL31P62899 125 aaKnown RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 DLK1P80370 383 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 EDDM3AQ14507 147 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 LRRC75BQ2VPJ9 315 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 ZNF672Q499Z4 452 aaPredicted RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 KHDC3LQ587J8 217 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 CXorf66Q5JRM2 361 aaPredicted RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 PRAMEF5Q5TYX0 476 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 Q6ZRG5 221 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 C1orf122Q6ZSJ8 110 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 MUC15Q8N387 334 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 ZNF439Q8NDP4 499 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 OR9G1Q8NH87 305 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 C8orf46Q8TAG6 207 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 NANPQ8TBE9 248 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 CA5BP1Q8WTZ4 195 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 DDB2Q92466 427 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 R3HDM4Q96D70 268 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 NARS2Q96I59 477 aaKnown RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 BTF3L4Q96K17 158 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 RHOVQ96L33 236 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 ZNF714Q96N38 554 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 NKX6-2Q9C056 277 aaPredicted RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 MAGT1Q9H0U3 335 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 SLC35B3Q9H1N7 401 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 IFI27L2Q9H2X8 130 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 TUBA4BQ9H853 241 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 MANBALQ9NQG1 85 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 C19orf12Q9NSK7 152 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 UQCC1Q9NVA1 299 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 MIOXQ9UGB7 285 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 PSG11Q9UQ72 335 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 USP24Q9UPU5 2620 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 FAM208BQ5VWN6 2430 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
ERCC4-203ENST00000462862 PKD1L2Q7Z442 2459 aa3.41□□□□□ -1.86
ERCC4-203ENST00000462862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 MED19A0JLT2 244 aaPredicted RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 SMCO3A2RU48 225 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 CXorf65A6NEN9 183 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 C15orf61A6NNL5 157 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 OOSP1A8MZH6 123 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 F8W036 122 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 RNASEK-C17orf49H0YIS7 233 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 K7EM74 188 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 LOC400499M0QZD8 3231 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 M0R1W7 72 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 M0R1X1 148 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 CORTO00230 105 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 CCL21O00585 134 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 TNFRSF13BO14836 293 aaPredicted RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 TGOLN2O43493 480 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 TNFSF12O43508 249 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 FCGR3BO75015 233 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 RBMXL2O75526 392 aaKnown RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 MT-CO2P00403 227 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 KRASP01116 189 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 IGHV2-70P01814 119 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 LIPFP07098 398 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 THBDP07204 575 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 ZNF16P17020 682 aaPredicted RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 EGR1P18146 543 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 USF1P22415 310 aaPredicted RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 ATP6V0CP27449 155 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 CEACAM3P40198 252 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 PSMB3P49720 205 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 DYNLT3P51808 116 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 SUB1P53999 127 aaKnown RBP eCLIP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 NHLH2Q02577 135 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 PAX2Q02962 417 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 SLC38A11Q08AI6 406 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 ZNF616Q08AN1 781 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 CLINT1Q14677 625 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 GUK1Q16774 197 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 C17orf58Q2M2W7 97 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 ACOT6Q3I5F7 207 aaPredicted RBP3.4□□□□□ -1.87
ERCC4-203ENST00000462862 FAM74A3Q4VXF1 159 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM177Q53S58 311 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 TMEM41BQ5BJD5 291 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 FAM74A1Q5RGS3 127 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 NCR3LG1Q68D85 454 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 VHLLQ6RSH7 139 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 UNQ6494/PRO21346Q6UXR6 183 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 ZNF833PQ6ZTB9 187 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 SSX9Q7RTT3 188 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 SLC35E3Q7Z769 313 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 S100A7AQ86SG5 101 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 DTX2Q86UW9 622 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 LRP11Q86VZ4 500 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 BATF2Q8N1L9 274 aa3.4□□□□□ -1.87
ERCC4-203ENST00000462862 PNKDQ8N490 385 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms