RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 LIPT2A6NK58 231 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 E9PLN8 166 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 C11orf98E9PRG8 122 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 CHST1O43916 411 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 MT-ND6P03923 174 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 RHOBP62745 196 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 SRSF7Q16629 238 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 BAGE3Q86Y29 109 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 CALHM1Q8IU99 346 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 Q8NFD4 153 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 PLPPR1Q8TBJ4 325 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR51E1Q8TCB6 317 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 DYRK2Q92630 601 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 VKORC1Q9BQB6 163 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 TBL2Q9Y4P3 447 aaKnown RBP9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 ESPL1Q14674 2120 aa9.68□□□□□ -0.86
TRAPPC3-205ENST00000462715 A0A1W2PP11 408 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 SLC33A1O00400 549 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 EFNA2O43921 213 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 WISP1O95388 367 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 CEACAM3P40198 252 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 TMEM211Q6ICI0 200 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 ABHD3Q8WU67 409 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 ASB10Q8WXI3 467 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 PP6455Q8WZ26 134 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 KLHL13Q9P2N7 655 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 UBE2J1Q9Y385 318 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 MED12Q93074 2177 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 CCL21O00585 134 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 TNFSF11O14788 317 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 TMEM50AO95807 157 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 THBS3P49746 956 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 CLDN15P56746 228 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 PHLDA2Q53GA4 152 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 Q6ZS49 121 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 ZNF525Q8N782 197 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR5D13Q8NGL4 314 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR10D3Q8NH80 312 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 TRIB1Q96RU8 372 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
TRAPPC3-205ENST00000462715 A0A0J9YW62 118 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 DPRXA6NFQ7 191 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 FCGR2AP12318 317 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 HINT1P49773 126 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 BIDP55957 195 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 CXorf66Q5JRM2 361 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 FFAR4Q5NUL3 377 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 CFAP161Q6P656 301 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 FOXN4Q96NZ1 517 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 GNB1LQ9BYB4 327 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 ADAM20O43506 726 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 S1PR2O95136 353 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 MPZL1O95297 269 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 IGLV3-1P01715 115 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 ZNF121P58317 390 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 PAX2Q02962 417 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 MYBPHQ13203 477 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR4F17Q8NGA8 305 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 UHRF2Q96PU4 802 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR4F4Q96R69 305 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 PRRG4Q9BZD6 226 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 WDR61Q9GZS3 305 aaKnown RBP9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 MRPL18Q9H0U6 180 aaKnown RBP9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 PPIAL4AQ9Y536 164 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 FAM215AQ9Y5M1 114 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 RELNP78509 3460 aa9.66□□□□□ -0.86
TRAPPC3-205ENST00000462715 TRAV9-2A0A087WT02 112 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 IGKV1-9A0A0C4DH69 117 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 SLC22A20A6NK97 555 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 DNPH1O43598 174 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 CXCL13O43927 109 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 CTSSP25774 331 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 RAC3P60763 192 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 KRTDAPP60985 99 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 FLNCQ14315 2725 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 WDR73Q6P4I2 378 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 FAM57BQ71RH2 274 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 LINC00346Q8IVM7 164 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 DEFB125Q8N687 156 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 OR4F5Q8NH21 305 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 CLCF1Q9UBD9 225 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 POLR1DQ9Y2S0 133 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 A0A1W2PNR3 127 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 G3V4G9 280 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 CNOT4O95628 575 aaKnown RBP9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 TMEM95Q3KNT9 176 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 TSPO2Q5TGU0 170 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 STUMQ69YW2 141 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 CRIP3Q6Q6R5 217 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 MEX3BQ6ZN04 569 aaKnown RBP9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 BHLHA15Q7RTS1 189 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 RNF144BQ7Z419 303 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 C6orf201Q7Z4U5 140 aa9.65□□□□□ -0.86
TRAPPC3-205ENST00000462715 ABHD12BQ7Z5M8 362 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms