RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 RIPPLY3P57055 190 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 LINC00205P59089 165 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 RRAS2P62070 204 aaPredicted RBP8.58□□□□□ -1.04
RTF1-202ENST00000462276 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
RTF1-202ENST00000462276 CYCSP99999 105 aaKnown RBP8.58□□□□□ -1.04
RTF1-202ENST00000462276 VMA21Q3ZAQ7 101 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 RBMS3Q6XE24 437 aaKnown RBP8.58□□□□□ -1.04
RTF1-202ENST00000462276 C16orf82Q7Z2V1 217 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 TEX45Q8NA69 505 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 OR52B4Q8NGK2 314 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 C17orf50Q8WW18 174 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 SSMEM1Q8WWF3 244 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 R3HDM4Q96D70 268 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 HARBI1Q96MB7 349 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 COA4Q9NYJ1 87 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 MMP24Q9Y5R2 645 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 CR1P17927 2039 aa8.58□□□□□ -1.04
RTF1-202ENST00000462276 SONP18583 2426 aaKnown RBP8.58□□□□□ -1.04
RTF1-202ENST00000462276 A0A1B0GU03 582 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 MARCH11A6NNE9 402 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 S1PR2O95136 353 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 KRASP01116 189 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 AKR1C2P52895 323 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 UBE2KP61086 200 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 DEFB112Q30KQ8 113 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 OR2B11Q5JQS5 317 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
RTF1-202ENST00000462276 Q6YL49 198 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 H2BFWTQ7Z2G1 175 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 DYNAPQ8N1N2 210 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 SLC35G3Q8N808 338 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 UXS1Q8NBZ7 420 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 DMBX1Q8NFW5 382 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 NPBQ8NG41 125 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 RNASE11Q8TAA1 199 aaKnown RBP8.57□□□□□ -1.04
RTF1-202ENST00000462276 CHAC2Q8WUX2 184 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 SEC22AQ96IW7 307 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
RTF1-202ENST00000462276 SSX3Q99909 188 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 ZFP57Q9NU63 452 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 FKBP11Q9NYL4 201 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 POMT1Q9Y6A1 747 aa8.57□□□□□ -1.04
RTF1-202ENST00000462276 IGHV3-72A0A0B4J1Y9 119 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 SNAPC5O75971 98 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 OR2A4O95047 310 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 IGKV1D-33P01593 117 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 IGKV1-33P01594 117 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 IGKV1-39P01597 117 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 IGKV1D-39P04432 117 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 SNRNP70P08621 437 aaKnown RBP8.56□□□□□ -1.04
RTF1-202ENST00000462276 SULT1A3P0DMM9 295 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 SULT1A4P0DMN0 295 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 TMEM11P17152 192 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 SRD5A1P18405 259 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 HES1Q14469 280 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 GSG1LQ6UXU4 331 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 LYZL2Q7Z4W2 148 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 Q8N6K4 173 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 LHFPL5Q8TAF8 219 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 OR2A7Q96R45 310 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.56□□□□□ -1.04
RTF1-202ENST00000462276 KIAA1456Q9P272 454 aa8.56□□□□□ -1.04
RTF1-202ENST00000462276 RRHO14718 337 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 NBR2O15453 112 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 FGF16O43320 207 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 OR2F2O95006 317 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 NDUFA3O95167 84 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 LY86O95711 162 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 IGKV1-5P01602 117 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 IL6RP08887 468 aaPredicted RBP8.55□□□□□ -1.04
RTF1-202ENST00000462276 HOXB5P09067 269 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 P0C879 139 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 MAS1LP35410 378 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 G6PCP35575 357 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 IER3P46695 156 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 SRSF4Q08170 494 aaKnown RBP8.55□□□□□ -1.04
RTF1-202ENST00000462276 PSG5Q15238 335 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 MMDQ15546 238 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 AARDQ4LEZ3 155 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 GGNBP1Q5YKI7 109 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 FOXRED2Q8IWF2 684 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 PUSL1Q8N0Z8 303 aaKnown RBP8.55□□□□□ -1.04
RTF1-202ENST00000462276 BCL6BQ8N143 479 aaPredicted RBP8.55□□□□□ -1.04
RTF1-202ENST00000462276 OR5M8Q8NGP6 311 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 TMEM167AQ8TBQ9 72 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 PIFOQ8TCI5 191 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 C2orf50Q96LR7 162 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 RBM14Q96PK6 669 aaKnown RBP8.55□□□□□ -1.04
RTF1-202ENST00000462276 SMR3AQ99954 134 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 TMEM140Q9NV12 185 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 PRNDQ9UKY0 176 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 TCF19Q9Y242 345 aa8.55□□□□□ -1.04
RTF1-202ENST00000462276 C5orf51A6NDU8 294 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 A6NDX4 124 aa8.54□□□□□ -1.04
RTF1-202ENST00000462276 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms