RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ELK1P19419 428 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 TPPP2P59282 170 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 RPL30P62888 115 aaKnown RBP11.97□□□□□ -0.49
VARS-219ENST00000461328 TNXAQ16473 311 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 AKIRIN2Q53H80 203 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 C19orf54Q5BKX5 351 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 ZNF66Q6ZN08 573 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 OVCH2Q7RTZ1 564 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 CLVS1Q8IUQ0 354 aaPredicted RBP11.97□□□□□ -0.49
VARS-219ENST00000461328 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 TEX45Q8NA69 505 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 MS4A10Q96PG2 267 aa11.97□□□□□ -0.49
VARS-219ENST00000461328 K7EIL1 84 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 MPPED1O15442 326 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 HLA-DMAP28067 261 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 KIR2DS2P43631 304 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 RFX2P48378 723 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 CATR1Q13166 79 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 RNASE12Q5GAN4 147 aaKnown RBP11.96□□□□□ -0.49
VARS-219ENST00000461328 MFSD4AQ8N468 514 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 OR11H1Q8NG94 326 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 GIMAP1Q8WWP7 306 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 GPHA2Q96T91 129 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 SCPEP1Q9HB40 452 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 ANAPC10Q9UM13 185 aa11.96□□□□□ -0.49
VARS-219ENST00000461328 WI2-2373I1.2A0A1W2PRP0 233 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 TRGV3P03979 118 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 OR8U8P0C7N1 319 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 APELAP0DMC3 54 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 HRH1P35367 487 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 ZNF616Q08AN1 781 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 MSMO1Q15800 293 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 PRSS8Q16651 343 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 DEFB121Q5J5C9 76 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 AADACL3Q5VUY0 350 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 POC5Q8NA72 575 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 OR5T1Q8NG75 326 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 OR1N2Q8NGR9 330 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 OR51H1Q8NH63 302 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 VSTM2AQ8TAG5 236 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 RAB2BQ8WUD1 216 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 BORCS5Q969J3 196 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
VARS-219ENST00000461328 SLA2Q9H6Q3 261 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 EXTL2Q9UBQ6 330 aa11.95□□□□□ -0.5
VARS-219ENST00000461328 ZMAT5Q9UDW3 170 aaKnown RBP11.95□□□□□ -0.5
VARS-219ENST00000461328 SULT1C2O00338 296 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 RGS5O15539 181 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 IGHV3-11P01762 117 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 RCVRNP35243 200 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 TSPAN5P62079 268 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 SSBP2P81877 361 aaPredicted RBP11.94□□□□□ -0.5
VARS-219ENST00000461328 EIF4EBP1Q13541 118 aaPredicted RBP11.94□□□□□ -0.5
VARS-219ENST00000461328 DYRK1AQ13627 763 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 KIAA0141Q14154 515 aaPredicted RBP11.94□□□□□ -0.5
VARS-219ENST00000461328 ZNF818PQ6ZRF7 136 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 MMD2Q8IY49 270 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 SPAG16Q8N0X2 631 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 GPX8Q8TED1 209 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 SRSF12Q8WXF0 261 aaKnown RBP11.94□□□□□ -0.5
VARS-219ENST00000461328 TMEM68Q96MH6 324 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
VARS-219ENST00000461328 ZNF430Q9H8G1 570 aaPredicted RBP11.94□□□□□ -0.5
VARS-219ENST00000461328 COA4Q9NYJ1 87 aa11.94□□□□□ -0.5
VARS-219ENST00000461328 MSGN1A6NI15 193 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 I3L521 148 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 HRASP01112 189 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
VARS-219ENST00000461328 NAT1P18440 290 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 DGCR2P98153 550 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 RUNX1Q01196 453 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 FHL3Q13643 280 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 SPCS2Q15005 226 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 C9orf66Q5T8R8 295 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 OR6F1Q8NGZ6 308 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 MOB3AQ96BX8 217 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 ADAM30Q9UKF2 790 aa11.93□□□□□ -0.5
VARS-219ENST00000461328 C13orf42A0A1B0GVH6 325 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 H3BUA1 57 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 RAMP3O60896 148 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 KBTBD11O94819 623 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 OR2A4O95047 310 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 RPL5P46777 297 aaKnown RBP11.92□□□□□ -0.5
VARS-219ENST00000461328 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 RHOVQ96L33 236 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 OR2A7Q96R45 310 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 SPIN2AQ99865 258 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 SPIN2BQ9BPZ2 258 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 FXYD6Q9H0Q3 95 aa11.92□□□□□ -0.5
VARS-219ENST00000461328 A0A0G2JLM5 398 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 LINC01619G3V211 115 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 RLN1P04808 185 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 TMBIM6P55061 237 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 MRGPRG-AS1Q2M3A8 158 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 DHRS11Q6UWP2 260 aa11.91□□□□□ -0.5
VARS-219ENST00000461328 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms