RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PKIBQ9C010 78 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DOK5Q9P104 306 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 NAT8BQ9UHF3 227 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 KIF26AQ9ULI4 1882 aaPredicted RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 A0A1B0GV72 72 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DUXBA0A1W2PPF3 345 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A10PA6NDY2 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A18PA6NE21 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A16PA6NEW6 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A20PA6NIJ5 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A8PA6NJQ4 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A7PA6NKC0 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A22PA8MWA6 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A12PA8MX19 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A5PA8MXJ8 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A23PA8MXZ1 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PIN1P1O15428 100 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A15PP0C7V4 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A13PP0C7W8 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A14PP0C7W9 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM90A24PP0C7X0 464 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MMP9P14780 707 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CRYBA2P53672 197 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 EWSR1Q01844 656 aaKnown RBP eCLIP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZNF774Q6NX45 483 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 LYZL2Q7Z4W2 148 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZAR1Q86SH2 424 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DMRTC2Q8IXT2 367 aaPredicted RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CYB561D1Q8N8Q1 229 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ADAMTS17Q8TE56 1095 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ITLN2Q8WWU7 325 aaPredicted RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TBX15Q96SF7 602 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SLC25A22Q9H936 323 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 GREB1Q4ZG55 1949 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 IGHV3OR16-12A0A075B7B8 117 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SHISA8B8ZZ34 492 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 RER1O15258 196 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HTN3P15516 51 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CCL8P80075 99 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PAX5Q02548 391 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CIRBPQ14011 172 aaKnown RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 OR4A4PQ8NGN8 299 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ITLN1Q8WWA0 313 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 RARRES2Q99969 163 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PARD6GQ9BYG4 376 aaPredicted RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TBL2Q9Y4P3 447 aaKnown RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 A0A1W2PRX2 142 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 NPIPB9F8W1W9 429 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PDCD6O75340 191 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HSBP1O75506 76 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CD1AP06126 327 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PGA4P0DJD7 388 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PGA5P0DJD9 388 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 LCN2P80188 198 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FAM3AP98173 230 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 KHDC3LQ587J8 217 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 C9orf66Q5T8R8 295 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CBLN3Q6UW01 205 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 BLNKQ8WV28 456 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SLC25A33Q9BSK2 321 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 NINQ8N4C6 2090 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 J3QR06 171 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MBPP02686 304 aaPredicted RBP5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TTRP02766 147 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SCTP09683 121 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 VSIG8P0DPA2 414 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HKR1P10072 659 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MAS1LP35410 378 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FUT5Q11128 374 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DEFB113Q30KQ7 82 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 C11orf42Q8N5U0 333 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 VN1R17PQ8TDU5 208 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MRPL37Q9BZE1 423 aaKnown RBP5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 RNF122Q9H9V4 155 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM74BQ9NUR3 256 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HS3ST3B1Q9Y662 390 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 GYPAP02724 150 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ATP6V0CP27449 155 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TNFRSF9Q07011 255 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SLC38A11Q08AI6 406 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SNRNP40Q96DI7 357 aaKnown RBP5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SOSTQ9BQB4 213 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HILPDAQ9Y5L2 63 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ANAPC1Q9H1A4 1944 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 IGHV3-64DA0A0J9YX35 117 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 H3BMH7 237 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SRSF3P84103 164 aaKnown RBP5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 BSPH1Q075Z2 132 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 IL24Q13007 206 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 VN1R4Q7Z5H5 301 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM54Q969K7 222 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 OR10C1Q96KK4 312 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PAXXQ9BUH6 204 aa5.34□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SCGB1C2P0DMR2 95 aa5.34□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PRR27Q6MZM9 219 aa5.34□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM53AQ6NSI3 398 aaPredicted RBP5.34□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RNASEKQ6P5S7 137 aaKnown RBP5.34□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LRRC75A-AS1Q8N1F1 130 aa5.34□□□□□ -1.56
HLA-DQA1-205ENST00000460633 OR10G4Q8NGN3 311 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms