RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 PLPPR5Q32ZL2 321 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 DNAL1Q4LDG9 190 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 C9orf64Q5T6V5 341 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 FAM173BQ6P4H8 233 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 NAA40Q86UY6 237 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 GPHB5Q86YW7 130 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 CRLF3Q8IUI8 442 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 C15orf53Q8NAA6 179 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 ZNF75CPQ92670 426 aaPredicted RBP0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 ZNF514Q96K75 400 aaPredicted RBP0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 MED10Q9BTT4 135 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 ZNHIT6Q9NWK9 470 aaKnown RBP0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 CHMP5Q9NZZ3 219 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 C22orf24Q9Y442 160 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 SDK1Q7Z5N4 2213 aa0.48□□□□□ -2.33
SCARNA18-201ENST00000459004 TEX50A0A1B0GTY4 177 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 A0A1B0GW54 56 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 MEIS3P1A6NDR6 274 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 OR51F1A6NGY5 319 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 H3BT86 120 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 AZIN1O14977 448 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 STX10O60499 249 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 NEMFO60524 1076 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 SCN2BO60939 215 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 HLA-DQB2P05538 268 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 DEFA4P12838 97 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 CXCL2P19875 107 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 CXCL3P19876 107 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 SLCO1A2P46721 670 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 RPL28P46779 137 aaKnown RBP0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 RAB14P61106 215 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 RASSF6Q6ZTQ3 369 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 TMEM109Q9BVC6 243 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 CHST6Q9GZX3 395 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 OR52A5Q9H2C5 316 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 GLI3P10071 1580 aa0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 ZFHX2Q9C0A1 2572 aaPredicted RBP0.47□□□□□ -2.33
SCARNA18-201ENST00000459004 C5orf49A4QMS7 147 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 F8VZ95 297 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 TOX3O15405 576 aaPredicted RBP0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 YKT6O15498 198 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 ATP8B1O43520 1251 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 ADAP1O75689 374 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 ATP6V1G2O95670 118 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 ORM1P02763 201 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 IL6P05231 212 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 RPS24P62847 133 aaKnown RBP0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 HLA-DRB3P79483 266 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 ACSM3Q53FZ2 586 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 DYNAPQ8N1N2 210 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 RPP25LQ8N5L8 163 aaKnown RBP0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 SPERTQ8NA61 448 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 OR5L1Q8NGL2 311 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 SLC37A2Q8TED4 501 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 RAB2BQ8WUD1 216 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 TIPINQ9BVW5 301 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 NSRP1Q9H0G5 558 aaKnown RBP0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 XAGE1AQ9HD64 81 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 TP53TG1Q9Y2A0 90 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 PCDH15Q96QU1 1955 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 FBN2P35556 2912 aa0.46□□□□□ -2.34
SCARNA18-201ENST00000459004 MYOFQ9NZM1 2061 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 TENM3Q9P273 2699 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 LAMB4A4D0S4 1761 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 TMED7-TICAM2A0A0A6YYA0 188 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 FTCDNL1E5RQL4 147 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 K7ERQ8 282 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 APOMO95445 188 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 NPPAP01160 153 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 PPBPP02775 128 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 MSMBP08118 114 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 TRGC1P0CF51 173 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 RD3LP0DJH9 198 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 C10orf55Q5SWW7 151 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 SPATA24Q86W54 205 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 BOD1L2Q8IYS8 172 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 ANKRD36BP1Q96IX9 119 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 SLC22A4Q9H015 551 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 CD300AQ9UGN4 299 aa0.45□□□□□ -2.34
SCARNA18-201ENST00000459004 TMEM213A2RRL7 107 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 IBA57-AS1B1ANH7 110 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 SMLR1H3BR10 107 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 COX7A2LO14548 114 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 MSNP26038 577 aaKnown RBP0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 CD40LGP29965 261 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 REG1BP48304 166 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 ANGPT1Q15389 498 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 FAM27BQ5VT28 67 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 GID4Q8IVV7 300 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 UMODL1-AS1Q8N2C9 162 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 RIBC1Q8N443 379 aaPredicted RBP0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 C9orf163Q8N9P6 203 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 ASB13Q8WXK3 278 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 TESCQ96BS2 214 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 CCL13Q99616 98 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 HES4Q9HCC6 221 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 TREM1Q9NP99 234 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 NAT8Q9UHE5 227 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 CFAP45Q9UL16 551 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 SNURFQ9Y675 71 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms