RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CD55P08174 381 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 IL6RP08887 468 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 STAG3L2P0CL84 134 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 STAG3L3P0CL85 134 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ARL14EPLP0DKL9 152 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 IGHV3-43DP0DP04 118 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 AREGP15514 252 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 PAX1P15863 534 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CRISP2P16562 243 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 SPINK2P20155 84 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 IGHV1-2P23083 117 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TNFSF4P23510 183 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 NPY1RP25929 384 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 GCHFRP30047 84 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 PRDX2P32119 198 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 DUTP33316 252 aaKnown RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 MPV17P39210 176 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ATP5G3P48201 142 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CEBPDP49716 269 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 GNG4P50150 75 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ERVFC1-1P60608 527 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 YPEL3P61236 119 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 GNB1P62873 340 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ZXDAP98168 799 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TLE1Q04724 770 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 EIF4EBP1Q13541 118 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 RTP5Q14D33 572 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 LTC4SQ16873 150 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TIGITQ495A1 244 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 AARDQ4LEZ3 155 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 SPINK9Q5DT21 86 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 C1orf194Q5T5A4 169 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 FAM162BQ5T6X4 162 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 MBNL2Q5VZF2 373 aaKnown RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CDPF1Q6NVV7 123 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TOMM20LQ6UXN7 152 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 WDR82Q6UXN9 313 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 BHLHA15Q7RTS1 189 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TMEM144Q7Z5S9 345 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 WDR86Q86TI4 376 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CXorf67Q86X51 503 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 SIGLECL1Q8N7X8 197 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 SLC24A4Q8NFF2 622 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 OR13A1Q8NGR1 328 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 OR1L6Q8NGR2 347 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 SGMS2Q8NHU3 365 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 GATAD1Q8WUU5 269 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ZCCHC14Q8WYQ9 949 aaKnown RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ZDHHC16Q969W1 377 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 C11orf52Q96A22 123 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 COQ2Q96H96 371 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 LOXL4Q96JB6 756 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 YPEL2Q96QA6 119 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CHRDL1Q9BU40 450 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 VAMP8Q9BV40 100 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 C19orf24Q9BVV8 132 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ELOVL1Q9BW60 279 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 GGTLC1Q9BX51 225 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 MS4A5Q9H3V2 200 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 NCOR1P1Q9H4R4 102 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 PATZ1Q9HBE1 687 aaKnown RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 NPVFQ9HCQ7 196 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TMEM140Q9NV12 185 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 ELOVL5Q9NYP7 299 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TECRQ9NZ01 308 aaKnown RBP2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 IL36BQ9NZH7 164 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 FOXJ2Q9P0K8 574 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CLCF1Q9UBD9 225 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 PROCRQ9UNN8 238 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 TCF19Q9Y242 345 aa2.78□□□□□ -1.96
HMGN1P18-201ENST00000457642 CHD3Q12873 2000 aaKnown RBP2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 TRAV17A0A0B4J275 112 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 KIR2DL5BA0A0G2JN68 375 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 KIR2DL5BA0A0G2JPC4 375 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 IGHV3-64DA0A0J9YX35 117 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 SCO2A0A1W2PP80 73 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 C19orf67A6NJJ6 358 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 LINC00473A8K010 186 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 DEFB108AA8MXU0 73 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 PRR33A8MZF0 331 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 SNURFLB1AK76 121 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 SRRM5B3KS81 715 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 F2RL2O00254 374 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 FCN1O00602 326 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 AQP7O14520 342 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 WNT9BO14905 357 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 TCAPO15273 167 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 IGKV3-15P01624 115 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 IGHG3P01860 377 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 APOA2P02652 100 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 RPLP1P05386 114 aaKnown RBP2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 CELA3BP08861 270 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 OR5G3P0C626 314 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 OR9G9P0C7N8 305 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 CECR9P0C854 216 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 C1QTNF9P0C862 333 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 IRF2P14316 349 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 ADMP35318 185 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 SSTR5P35346 364 aa2.77□□□□□ -1.97
HMGN1P18-201ENST00000457642 TIMP3P35625 211 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms